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CRISPRs details
NC_015949_2
Flanking alignement tool
Page manual
  
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NC_015949_2                                                                                                                 
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Strain :
Caldicellulosiruptor lactoaceticus 6A
RefSeq :
NC_015949 (chromosome circular)
CRISPR id :
NC_015949_2
DR consensus (30 bp) :
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
Number of repetitions :
36
Begin Position :
2552404
End Position :
2554751
2552404
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
TTACTACGATTTTTTTCTTTCCGTCAATACAAACCAG
2552470
2552471
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
CTATAATCAACTCTGCGCCACCTCCTTTTTTACTCA
2552536
2552537
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
AACCCTCCCATTTTTTATTTTTTTTTCAAACCCCA
2552601
2552602
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
TTTCACAGTACTTTCTAACAAATTCTAACATTTTCCT
2552668
2552669
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
CGTCAAACACAAACCCTTTTGAATCTTCTAAGACCC
2552734
2552735
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
AACCCTCCCATTTTTTATTTTTTTTCAAACCCCA
2552798
2552799
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
AGGTCTATGATAAGGAGGGTTAAAGGATCTGTTAAG
2552864
2552865
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
CGAATTCCATTTGTCATAACCAACCCAATAAGCATA
2552930
2552931
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
AAGTACTCAAGCATCGTGGACAATAAGCTATTCCTT
2552996
2552997
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
ATGATAAGAGCGAATGGATAGATGAAAGGTGCTGG
2553061
2553062
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
TCCTTAAATACTATATTATTATTACCCTTAACCCCT
2553127
2553128
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
TCTATAACTCTTTTGATAACCCCTTCTCCCCTTCCTA
2553194
2553195
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
TGATATTTGCAAGAGCATCTAACAATACTCTTGAA
2553259
2553260
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
TCACTTCCCTTCAACAATATAGGAGTCTTAAACAAT
2553325
2553326
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
CATCCAACAAAATTCCCTCAATAACTGTCCTGAAAG
2553391
2553392
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
AACCGTATCCGCATGTCTTCTGTAATGTCGTTTCTG
2553457
2553458
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
TAATGTCTAACTCCTGCTTTATAACTCCATCTCGCAA
2553524
2553525
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
GAAAATATTGCGCTAAATAGTTTCTTAGCTCTGTA
2553589
2553590
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
CGGACAAATGGCTTGAGGACTGGGAACGCTATGTG
2553654
2553655
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
TCTTGCAAACACAACGGCAGGGCGTGATTTATATACATT
2553723
2553724
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
AAACCAAGGCAAGGGAAAAGGTTAAGCCCTAATCC
2553788
2553789
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
TTAGATGTCCTTGCAAATATCATAACATGTTCACTG
2553854
2553855
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
GTATAATATAGCTTCTGAACTTCTAACTTCTGTGCAAC
2553922
2553923
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
TATATACAACATGCAAAACCTTCACCTATAGGCATT
2553988
2553989
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
AATATCCTGCTTTTTTCCCATACACATTCCATTATG
2554054
2554055
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
GGATAAAATACAAAAAGGCGAGATTATTGCATGTGA
2554120
2554121
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
TCTCATCAGCTAATTCCCTCAAAACAACATCAAGGC
2554186
2554187
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
TTGTGAAGAACCTTTCTAAATATTAACTTTACCATT
2554252
2554253
GTTTGTAGCCTCCCCTTTGGGGATTGAAAC
TTTCTGATAGGTTAGGCCATTCGCAAATCTCAAG
2554316
2554317
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
AATACAAGTATATTGCGTGGCTTGCCATAAGGCTT
2554381
2554382
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
TGGAAGCATATTTAAAGAAAAAGCGTTCACTACAAA
2554447
2554448
GTTTGTAGCCTCCCCTTTGGGGATTGAAAC
CATAAATTCGTTTACTTCTTCTATTTCGTAATGCCCA
2554514
2554515
GTTTGTAGCCTCCCCTTTGGGGATTGAAAC
AGAAATTCACTATCAAGACGACGTTTGCTGTTCGG
2554579
2554580
GTTTGTAGCCTCCCCTTTGGGGATTGAAAC
TTTCTGATAGGTTAGGCCATTCGCAAATCTCAAG
2554643
2554644
GTTTGTAGCCTTCCCTTTGGGGATTGAGGT
GGGAGGGGGGGTTTGTAGCCTCCCAGTTGGGGATTGAGGAGAGAGAGA
2554721
2554722
GTTTGTAGCCTGTCCTTTGGAGATTGAGAA
2554751
Left flanking sequence : Till position 2552404 (length
bp)
TGTTGACTTTCAAGAGTTTGTGGGGTATAATAGAAATAACCTATAGCAGCTTGAAAACTTAACCATTTGT
TCCTTGCGGCTTTTCTCAAACTATCTACGG
Right flanking sequence : From position 2554751 (length
bp)
GAAATGGGGGGTTGTAGCATCACCCTTTGAGGATCGAAAAGAAAAAAGGGTAAGCCACCTCTTGGGAACT
GCATTTACAAAGTATTTTTTGTTTCTATAG
Print the CRISPR sequence : From position
bp To position
bp