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CRISPRs details
NC_015949_4
Flanking alignement tool
Page manual
  
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NC_015949_4                                                                                                                 
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Strain :
Caldicellulosiruptor lactoaceticus 6A
RefSeq :
NC_015949 (chromosome circular)
CRISPR id :
NC_015949_4
DR consensus (30 bp) :
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
Number of repetitions :
31
Begin Position :
2569259
End Position :
2571288
2569259
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
TGATAAAAACCACAACCATTGTTTGTATTTTTCCAT
2569324
2569325
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
CTTCAAAAAGAAGAAAACAGTTAAGTATCGCTGTAA
2569390
2569391
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
TTCTATCTTCTTCAAAACTCCACAATTTGGGTAAAC
2569456
2569457
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
CCCCTCCTTAATTTATTTTTCATCCCCAACTTGAAA
2569522
2569523
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
CACAAAATTATAGTTTTGTGCAGTATGAACCCTGC
2569587
2569588
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
ACTCTCTCTAATTACTAATTAATTTTTTATTTTTT
2569652
2569653
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
TTGCTTCCCAATCTAAAATTTTTCGAGCCTTTAGA
2569717
2569718
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
GGTTTTTCGGTCTTTTCCCATTTTTTGTTTTTGCCA
2569783
2569784
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
ATTTTTTCAATGTGTTAAATTGGTTTAATAGATTT
2569848
2569849
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
TCTGGTATATTCTCCACCCAGTCTCTCCCCCAGCTT
2569914
2569915
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
AGACATAGAATAACACTGCAAAAAAACATTCCCATAA
2569981
2569982
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
AATTGTCGCTCTCAAAGATGTAACCCACGTTATACG
2570047
2570048
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
AAATCAACTAAAACTCCAATCTCTCTACCTCTTT
2570111
2570112
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
CATCAATAAATCTAATACACCTTTAAAAAATTCCAG
2570177
2570178
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
CCGTCAATGATTCTTTTGATTTTTCCTTCTCCTTT
2570242
2570243
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
AAATTTTCATTCTAAACCCTCCTTTTCTGTTTTTT
2570307
2570308
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
AAAAACTCCAAGCGTGCTGCCTTGTAACCGTGGTGG
2570373
2570374
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
ACGACTGCAAAATTTCTTCTACATCTTTTTTTGATG
2570439
2570440
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
TCAAGAACAATATTGTTTGTTGTGTCTTCCTCATGCTCGA
2570509
2570510
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
AACAACGCTCCACTCATCTAAAGCTTCCTTGTCAAA
2570575
2570576
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
ATATTTATCTTTATGTTTGTTACTACTACTCTTTC
2570640
2570641
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
AGGAAGGGCTTTCAAAATTTTTAAAAGGAGGAGAAC
2570706
2570707
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
AGCAATAAAAATTTTGCTTCAAAAAGAAGAAAACAA
2570772
2570773
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
GCCAAACATACAACCATCGCCAATTCATCAATTC
2570836
2570837
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
ACTTCTGGTTTAACTACATGAGAAACAAAACAAAGA
2570902
2570903
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
TCCATGTGACCAAACTCAGATGCCACCATGCAGTACA
2570969
2570970
GTTTGTAGCCTCCCCGTTGGGGATTGAAAC
TGATTAGAACCTTCCTCTTTCCCTCCTTTCTTTCAGA
2571036
2571037
GTTTGTGGCCTTCCCGTTGGGGATTGAAAC
ATGAAATTTCCCTTATGAAAATAGTTCCGGTAAACA
2571102
2571103
GTTTGTAGCCTCCCCGTTGGGGATTGAGGA
AGGAGGGGGTTTGTAGCCTTCCCGTTGGGGATTGAGGAGTAAGAATT
2571179
2571180
GTTTGTTGCCTATCCTTGGAAAATTGAGAA
TGGAGAAAGAGTTTACAACCTTTCTGTAGAAATCTATATGCGGTTCATG
2571258
2571259
GATTATAGTTTTTCCTTCAGGAATTGAGAA
2571288
Left flanking sequence : Till position 2569259 (length
bp)
TGTTGACTTTCAAGAGTTTGTGGGGTATAATAGAAATAACCTACAGCAGCTTGAAAACTTAACCATTTGT
TCCTTGCGGCTTTTCTCAAACTATCTACGG
Right flanking sequence : From position 2571288 (length
bp)
GAAGAGAAGATTTGTTATCTTTTGCTTTTATAAATTTTTTAGTGGTGGTATAATGAAAGGGGATAATAAA
AATTTATGAAGCGTTTAGTAATAAAGTACA
Print the CRISPR sequence : From position
bp To position
bp