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CRISPRs details
NC_015949_6
Flanking alignement tool
Page manual
  
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NC_015949_6                                                                                                                 
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Strain :
Caldicellulosiruptor lactoaceticus 6A
RefSeq :
NC_015949 (chromosome circular)
CRISPR id :
NC_015949_6
DR consensus (30 bp) :
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
Number of repetitions :
25
Begin Position :
2587709
End Position :
2589338
2587709
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
AATTTTGTCATATCCTTCCACTCAGGGAAAGCAGAG
2587774
2587775
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
TCTCCTTTACAAAAAGAATCAGGCTCGGAGAGGCGG
2587840
2587841
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
CCAACAACGTGCCTAACACCAGCGGTGCTAAATACAAG
2587908
2587909
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
ATCCACGTCTTCTTGTGTAAAACTTTTAGATTGG
2587972
2587973
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
TCAGCTAACTCCCTAACAACGACATCAAGTCGACTAACG
2588041
2588042
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
AAGTATTTCGATAATTCATCATCTAAAAAACCATCAG
2588108
2588109
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
GTATGAATTAACTAAACTGTCCCATGTAACAACTTCATC
2588177
2588178
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
TTATCAAACATGGTGCGTCAACTATGAGTAACAAT
2588242
2588243
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
ACAAACTTGACGCCAAAGAGTTTGCCTATCTCACCGT
2588309
2588310
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
TTCACTTTTTCCCAGCATTCGCAACAAACTTGTAAA
2588375
2588376
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
TGCACACCATCAGTTGCCGGTGCAACCGACCCCTCAAC
2588443
2588444
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
AAAACCTAAAGGGGAATTTTTGTTCCTCATTGAAA
2588508
2588509
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
CCGTCGTTTTAGTCGTTACAGTTATAGATATAGCTTTTG
2588577
2588578
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
CCTTTTAGAGCATAGTACATTTCAGCTACATAATCA
2588643
2588644
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
ATGCCATCAAAGCCATAACAAAAACAACAGCAATAG
2588709
2588710
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
CTTCTAAAACTGTTTTCCTTGCAAAGTCCTTGTCGATA
2588777
2588778
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
AATTACCAGCAAACAGGCACTATAATTGGTTGTTGC
2588843
2588844
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
CTCTTTTGCTTTCGTACTTTTGCTTTGTCTTCAGTATC
2588911
2588912
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
TCCTGTGAGGCAATGCGTTCGTTGTCTTTTTGCTTT
2588977
2588978
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
GGTGGAATGATGATATACTCAATTCTAACATCCTCA
2589043
2589044
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
GAAAACATCACAAAAGACGGCACACGAGGATTACTAA
2589110
2589111
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
GTTAAATCAAAACTCTCAATCTCTGCTATCTTTAC
2589175
2589176
GTTTGTAGCCTTCCCTTTGGGGATTGAAAC
TATTTTTATTTCCACTGGCAAGAGAGGAATGGAATTA
2589242
2589243
GTTTGTAGCCTCCCCTTTGGGGATTGAAAC
CCAAGAATAAACTCATCAAGGTTAGTAGTGCAGTTG
2589308
2589309
GTTTGTAGCCTTCCCTTTGGGGATTGAGGT
2589338
Left flanking sequence : Till position 2587709 (length
bp)
ATACAACTGGGTTTGTGCCGGTTTTGAGGGCATGTATTAAAATAAAAACATTGACAGTGGTGCATAAAGT
TGATATAATAAAATCAAGCTTTTTGACGGG
Right flanking sequence : From position 2589338 (length
bp)
GGGGGAGGGGTTTGTAGCCTCTCAGCTGGGGATTGAAACGCTTTATAAACCAGGTGACCTTGATACTGCG
CATTAGAAAGACGTTAATACAAATTATTGG
Print the CRISPR sequence : From position
bp To position
bp