CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_015970_4
Flanking alignement tool
Page manual
  
Home Page
NC_015970_4                                                                                                                 
top
Strain :
Rhodothermus marinus SG0.5JP17-172
RefSeq :
NC_015970 (plasmid pRHOM17201 c)
CRISPR id :
NC_015970_4
DR consensus (37 bp) :
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
Number of repetitions :
14
Begin Position :
58250
End Position :
59274
58250
ATTGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
TGGCACCCAGATCGTCCCGAGCCCGGTCAATATGCACGGT
58326
58327
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
TTGAAAAGCTTGTGCTCAACGAACAGGCGCGTATGC
58399
58400
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
AGGATCCTCAGGGGCAGCAGCGCATTCCGGACTGGGAGGCC
58477
58478
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
GATGAGCCAGACGAGGGGTGGGTAAATAAGTACTATGAC
58553
58554
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
CATCGACGGGCGTGAGATGGACGAGGATGCGCTCTACGAG
58630
58631
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
CTGGACTGGTGCCAGCGCTACCTCGGCGAAGAGGCC
58703
58704
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
CGACGATCGCACGCTGCTTATGGCGCTCATTCCC
58774
58775
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
TCATCGAAGAGATGATGGACGTGCTCGAAAAGCTTGAGC
58850
58851
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
GCAAGCGCTCAGCAGGCATTGTCGTTGAGCTGTAGCCAGCA
58928
58929
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
CGACTTGAAAGAAAGGTTCGACGTGCTCCCGTACGAGATCCCA
59008
59009
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
TCAAGGATGAGGTGCTGGGATGGACCAACAGAGCCAACAG
59085
59086
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
GCGACGTGGTGAGTCCCGACACCGGCCCGGAGAGTGCTAT
59162
59163
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
GGATCAATGAGCTTGGTTTCCAGGAGACTCCCAGCGGC
59237
59238
GTCGTAATCCCCTTTTCATCGGGTCAAGTCTTCGGAC
59274
Left flanking sequence : Till position 58250 (length
bp)
ATGCTTCAGGGAAGAAAAGCAAGACGACACGTCCCTGTCAAGACCGTGTCCTGCTGCCCCCGAAAAGCCT
CTTTCCTGTCGATTGTCTCGTCTAAAGCGG
Right flanking sequence : From position 59274 (length
bp)
CCCATTGTTACGGGGCCACTCAGAACCGGCCTTTTTGCGGTCAAACGGGCCGATTTTTGCGTGCGCAGAA
CGCCAAAAAACGGAACGAAATTTGCTTCCA
Print the CRISPR sequence : From position
bp To position
bp