Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_016645_2                                                                                                                 top


Strain : Pyrobaculum sp. 1860 RefSeq :NC_016645 (chromosome circular)
CRISPR id : NC_016645_2
DR consensus (25 bp) : GTTTCAACTATCTTTTGATTTCTGGNumber of repetitions :17
Begin Position : 761756 End Position : 762866

761756GTTTCAACTATCTTTTGATTTCTGGCCGTAGGCGGCGCCGCACAGCAGGCGCAGGTCAAGGTGACGTA 761823
761824GTTTCAACTATCTTTTGATTTCTGGTTGGCGAGAGGTTCGGCTGTCTTGCGTATGGCTATATCTTTATCGC 761894
761895GTTTCAACTATCTTTTGATTTCTGGGCCGGGCAACTCCGGTGGGCCGGCATATCTGAGGCAATGATT 761961
761962GTTTCAACTATCTTTTGATTTCTGGTTGCCGAGATGGTTGTGCTGAATTACTACACGTTACTTGTCTG 762029
762030GTTTCAACTATCTTTTGATTTCTGGTATGAGTGCCACCGGTACCCAACGTACTGCGCCCACAATATTCT 762098
762099GTTTCAACTATCCTTTGATTTCCGGTAGCTTAGTTGCCACGCACTCCGCGTAGCTCTCATGCCAGTA 762165
762166GTTTCAACTATTTTTTGATTTCCGGCGCTGTACCCGTAAAACTGCCTCCCCTCCAGAATCCAGTCCTC 762233
762234GTTTCAACTATCTTTTGATTTCCGGCCGCGATCCACTTGCGCGGTAGAGCGTGATCGGGGTAGAA 762298
762299GTTTCAACTATCTTTTGATTTCCGGCTGTACCTAAGCGACTATGACATGTGCTTGCGTTGTAGGGATGGT 762368
762369GTTTCAACTATCTTTTGATTTCCGGACTGGCGCCAGGCTCAGGAGGGTCAAGGCGGGTAGCCTCAGGCT 762437
762438GTTTCAACTATCTTTTGATTTCTGGGTCGGGGCACGCCCTGACGCGGATCCCCAGCTTCCTCCCGGTGTTTAT 762510
762511GTTTCAACTATCTTTTGATTTCTGGGGTCCTGAGGAAGATTAATTCGCGTTTAGCTGGCCCCAG 762574
762575GTTTCAACTATCTTTTGATTTCTGGATACCTCCAGAAAGAGCGGGGGAGCCGCCTCAGACAGATATAT 762642
762643GTTTCAACTATCTTTTGATTTCTGGGACATAAGGAACGCAGTTGACGTGGAGTACCTCCGCGCTGTGA 762710
762711GTTTCAACTATCTTTTGATTTCTGGCCGGCGTCTAGTAGCAACTTGGCAACTTCTACACTGTTGC 762775
762776GTTTCAACTATCTTTTGATTTCTGGTCCCTAGTCCCATAAACTAAACCCACGCTTTTTTCAAGGGC 762841
762842GTTTCAACTATCTTTTGATTTCTGG762866
Left flanking sequence : Till position 761756 (length bp)
TTGTATCGATAGTCGATACTACGTGCCGTGCTGATACACCACGCCTATGATCACCTCGGCGGTCGAGCAT
TTTAGCGGCCGGCCTCATCTCGCCTATCAT
Right flanking sequence : From position 762866 (length bp)
GGCTGGTTTTGTTGGTTTTTGTGGGTTTTTAAGTTTTTTGTAGGTTTTTTGTATCTTCGGTGGACGCTTT
TCTGCCGCGTTTTACATTCATATATGTCTC
Print the CRISPR sequence : From position bp To position bp