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CRISPRs details
NC_016856_4
Flanking alignement tool
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NC_016856_4                                                                                                                 
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Strain :
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S
RefSeq :
NC_016856 (chromosome circular)
CRISPR id :
NC_016856_4
DR consensus (29 bp) :
CGGTTTATCCCCGCTGGCGCGGGGAACAC
Number of repetitions :
27
Begin Position :
3114455
End Position :
3116070
3114455
ACGGCTATCCTTGTTGGCGCGGGGAACAC
ATCTTCATATTGCGTGACGCTGCCGATGAACG
3114515
3114516
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TCTTTATCAGCTAACCATTTCCAGAACTCGTC
3114576
3114577
CGGTTTATCCCTGCTGGCGCGGGGAACAC
TATAATATGAATTAATTTTTGCGCATAACCTG
3114637
3114638
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGCCCGTTCTGCCTCTTCGCACTCTCGATCAA
3114698
3114699
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGCGTAATGGGCTACCTGAACTTCACATATCC
3114759
3114760
CGGTTTATCCCCGCTAGCGCGGGGAACAT
ATTAAGCGCGCAAAGTTTGGGTTAATTGGACA
3114820
3114821
CGGTTTATCCCCGCTGGCGCGGGGAACAC
CGTATTCGTCACACAGCCCCGTCCAGAAATGA
3114881
3114882
CGGTTTATCCCCGCTGGCACGGGGAACAC
TAACGAACTGAATAAAATGTCAGAAAGTGACG
3114942
3114943
CGGCTTATCCCCGCTGGCGCGGGGAACAC
GCAGCTTAGCGACGAAATTAAAACCGAACTCAC
3115004
3115005
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGCCAGTGACTACAGAAGCGTCTCTATCGGGG
3115065
3115066
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ACCGATAAACAACCGCATAGCCTCTTTCGTTT
3115126
3115127
CGATTTATCCCTGCTGGCGCGGGGAACAC
TGCTCAATAACGTCGTAAATAGCGTAAGCTGG
3115187
3115188
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TATTTCGCCTTCGGCACTGACGTCACCGTCAA
3115248
3115249
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GTCGCGTTCGTTGCCGGTATAGACCAGCGTCA
3115309
3115310
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ATCGAATCGAAACCCCAGCCACAGAAATAATT
3115370
3115371
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ATCGAATCGAAACCCCAGCCACAGAAATAATT
3115431
3115432
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GCTCATGTCAAACGCCATCAGCGTTCCGGCAT
3115492
3115493
CGGTTTATCCCCGCTAGCGCGGGGAACAC
AATCGCCAGCCTCGGAAATATTCCATCCTCCG
3115553
3115554
CGGTTTATCCCCGCTGGCGCGGGGAACAC
AGGAACTAAACAGCCTGACCGTTGAGGATCTG
3115614
3115615
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ACCGGACAAATCTTTTTTTTCCTGTTCCTGTT
3115675
3115676
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GGGCACTATGAACGGATCGGCGCTGATGCCGG
3115736
3115737
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GGTAAAGCCACACCATTTTTTATTGACCTCGC
3115797
3115798
CGGTTTATCCCCGCTGGCGCGGGGAACAC
CTAGGAGGCGTAATGAATACTACGTATCAAAA
3115858
3115859
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GTGGTGGCCTCAAATAAATTCGAGCGCTGGAG
3115919
3115920
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GAAACGTAAACAGGGTAAGATACAACTCTGCA
3115980
3115981
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGTAAAGGGTGGTCTGGAAGGGGATCGGCAAA
3116041
3116042
CGGTTTATCCCCGCTGGCGCGGGGAACAC
3116070
Left flanking sequence : Till position 3114455 (length
bp)
CATGGCCTTCTCCTGTCTAAAAGCCTCCCCGGGAAAACGCGGCCTTTTTACTTTACAGGTTTGTAGCTGC
CATTACTGGTACACAGATTATGATTATGCA
Right flanking sequence : From position 3116070 (length
bp)
ACTAAACGGATATAATTGTTTATAAACTACTTTTTGTCAGCACCACATTCTACCAACATAATCGCAACAA
TTTAAATTATTAAAGAACAGCTAATTTGCT
Print the CRISPR sequence : From position
bp To position
bp