Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_016902_3                                                                                                                 top


Strain : Escherichia coli KO11FL RefSeq :NC_016902 (chromosome circular)
CRISPR id : NC_016902_3
DR consensus (29 bp) : GTGTTCCCCGCGCCAGCGGGGATAAACCGNumber of repetitions :15
Begin Position : 1074555 End Position : 1075437

1074555GTGTTCCCCGCGCCAGCGGGGATAAACCGGCAAAACCCTCGACTGGACAAATACCGGCGCG 1074615
1074616GTGTTCCCCGCGCCAGCGGGGATAAACCGGTCTGTTATGCGAATATTTTTATTCTACTTTA 1074676
1074677GTGTTCCCCGCGCCAGCGGGGATAAACCGGTTTTTACTCTCTGCCGCTGAGCGTCACACGG 1074737
1074738GTGTTCCCCGCGCCAGCGGGGATAAACCGGACTGCATATGAGCACGAGACACCCGGTAATT 1074798
1074799GTGTTCCCCGCGCCAGCGGGGATAAACCGCTATTCCCCTGACCGGACATACCCTGGACAAT 1074859
1074860GTGTTCCCCGCGCCAGCGGGGATAAACCGGGCGTCAAACTCTTTGTCACTCATACCAAAGA 1074920
1074921GTGTTCCCCGCGCCAGCGGGGATAAACCGCAAAATTTAAAATCATTTAAGCTTGTAAAACC 1074981
1074982GTGTTCCCCGCGCCAGCGGGGATAAACCGGGTACACGGATATTCTGTCTAAAAGTTAACTA 1075042
1075043GTGTTCCCCGCGCCAGCGGGGATAAACCGACTGATAACGCCGGAGCCTTCTTTTTCAGCAA 1075103
1075104GTGTTCCCCGCGCCAGCGGGGATAAACCGAGGTTGACGTTGATTTTGTTCGTTATGTTGCC 1075164
1075165GTGTTCCCCGCGCCAGCGGGGATAAACCGGCGTCTCGAGCGCGGGACGATTCAAAACCAGC 1075225
1075226GTGTTCCCCGCGCCAGCGGGGATAAACCGCCAAAGAAGAACAACGAGCCAACTGGTTTCAG 1075286
1075287GTGTTCCCCGCGCCAGCGGGGATAAACCGGCAATTTGTTGTCCGCGATCCGGTACGCGCGT 1075347
1075348GTGTTCCCCGCGCCAGCGGGGATAAACCGCGGCTATGGAATTTATGGAGAAGTTTGGTTTT 1075408
1075409GTGTTCCCCGCGCCAGCGGGGATAAACCG1075437
Left flanking sequence : Till position 1074555 (length bp)
ATAAGTTAGACGTTCTTTAAAAATAAGGAAATGTTTGAATTTAGTTGGTAGATTGTTGATGTGGAATAAA
TTTGTTTAAAAACAGATATGTATGCTTAGT
Right flanking sequence : From position 1075437 (length bp)
GGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCAT
TTTCAAACCCATCAAGACGCCTTCGCCAGC
Print the CRISPR sequence : From position bp To position bp