Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_017178_12                                                                                                                 top


Strain : Clostridium difficile 2007855 RefSeq :NC_017178 (chromosome circular)
CRISPR id : NC_017178_12
DR consensus (29 bp) : GTTTTATATTAACTATATGGAATGTAAATNumber of repetitions :5
Begin Position : 1608857 End Position : 1609150

1608857GTTTTATATTAACTATATGGAATGTAAATCTCGGAGAATTTCCTAATGTGGATTTAATAGGAAGT 1608921
1608922GTTTTATATTAACTATATGGAATGTAAATTTTAGCAAATTTTTCGTAAAAGTCACTATTTTCAATG 1608987
1608988GTTTTATATTAACTATATGGAATGTAAATACATATAAAACTTTCATCTTCTGTTAATTCATTAAAAC 1609054
1609055GTTTTATATTAACTATATGGAATGTAAATCCATCTTTTGTTGTTTTACATAAATTTATATTACTTAC 1609121
1609122GTTTTATACTAACTATACGGAATATAAAT1609150
Left flanking sequence : Till position 1608857 (length bp)
AGTGCATGATAAGCGTTATCAATTGCACTATTGCTCGTTCACTGCAAATTTAGGAGAGTTGTATACGTGT
AAGTGTTGAAAATACTAAGTTTATTTTGGG
Right flanking sequence : From position 1609150 (length bp)
TTTTATAATTTTCTTTTAATGTGTTATCTTATGATTATCTAGTTATATTAGCATACAAAAATATAATAAA
ATTACACTATATTATAAAAACCAAAAGGTA
Print the CRISPR sequence : From position bp To position bp