Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation


Other Tools


GPMS Links





NC_017179_14                                                                                                                 top


Strain : Clostridium difficile BI1 RefSeq :NC_017179 (chromosome circular)
CRISPR id : NC_017179_14
DR consensus (30 bp) : GTTTTATATTAACTATATGGAATGTAAATCNumber of repetitions :5
Begin Position : 1720112 End Position : 1720402

1720112GTTTTATATTAACTATATGGAATGTAAATCTTTGTAATGGTAGTGTATTTAAGATTGAAACATCAA 1720177
1720178GTTTTATATTAACTATATGGAATGTAAATCAACATTAGTAGTTGTCTTTATACACATAGCATCAC 1720242
1720243GTTTTATATTAACTATATGGAATGTAAATACAGCTCCCAAGACATACAACGAATCTGTAACATCAGT 1720309
1720310GTTTTATATTAACTATGTGGTATGTAAAAGACTTATTTACAGCTTTATTTGCTAAATCAGAAG 1720372
1720373GTTTTATATTAACTATGTGGACTTAAAATT1720402
Left flanking sequence : Till position 1720112 (length bp)
AAGGTTTGATAAGTGTTATCAATTGCACTATTACCCGCTCACTGCAAATTTGAGAAAGTTATATGTGTGT
AAGTCTTGGAAATACACAATTTATTTTGGG
Right flanking sequence : From position 1720402 (length bp)
AAAAATAATTAAAAAACACTTACTAATGTAGGTGTTTTTTTATTGAAAGGAAGTGATTATAATGTAAAAA
TTTTGAAGATATAGTATAATATTCTTATAA

Print the CRISPR sequence : From position bp To position bp