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CRISPRs details
NC_017273_4
Flanking alignement tool
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NC_017273_4                                                                                                                 
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Strain :
Thermus thermophilus SG0.5JP17-16
RefSeq :
NC_017273 (plasmid pTHTHE1601 c)
CRISPR id :
NC_017273_4
DR consensus (36 bp) :
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
Number of repetitions :
11
Begin Position :
128169
End Position :
128930
128169
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
ATTAGTCACGGCCCAAATGGCCGACGGCGACTACGA
128240
128241
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
CCGTTTAGAAAGCCAGCTTCTGAGCGCCCCTGAGGGAG
128314
128315
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
TCCCGTGGCCTCCAGGGCCTCGGCTCCTCCCTCGGGG
128387
128388
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
AACTCCCCGGCGAGATGGGCCACAGAGCGAACCCCTT
128460
128461
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
CACTACCTAGTGCACCAGATGCACTAGTCTCGGGGCT
128533
128534
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
GCCGTGCGGCGTGCCGGGTGGTCTACGGCCCCCCGC
128605
128606
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
ACTACCAAGGGGCGAGAGGAGAGATTTGGTTCGGGA
128677
128678
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
CCCGTAGCCGCCATTTGCTTTCCAAGCCACCACCT
128748
128749
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
TTCTCGCACCCCTCCTCCTCGGCGCGTGGGTCCACCAC
128822
128823
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
CAGATCTACCTCGGCCCGGGCGCCCTCGTGGACCCC
128894
128895
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
128930
Left flanking sequence : Till position 128169 (length
bp)
CTTTAGTCCCACGGCGCCTCCCCTAGCTTGACGCATAATCCCCCCGCGTGCGAAAATGGCCTCAAGACCC
CCCGCCTGGAGCCGCTTCCTGGAGGGGGCC
Right flanking sequence : From position 128930 (length
bp)
CCGAGATAAAAGCCGGTCGTGTAAGGATTTATGTGTAAGGGTCCGTGTTTAATAGGGGGGCACACCTTAG
CACGAGGAGGTGCCCCGTGGACCAGGATAC
Print the CRISPR sequence : From position
bp To position
bp