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CRISPRs details
NC_017304_4
Flanking alignement tool
Page manual
  
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NC_017304_4                                                                                                                 
top
Strain :
Clostridium thermocellum DSM 1313
RefSeq :
NC_017304 (chromosome circular)
CRISPR id :
NC_017304_4
DR consensus (30 bp) :
GTTTCAATTCCTCATAGGTACGATACAAAC
Number of repetitions :
49
Begin Position :
1930002
End Position :
1933245
1930002
ATTTCAATTCCTCATAGGTACGATACAAAC
GACTGAATCAAGACAACATTATTGTCGATGCTATTACA
1930069
1930070
ATTTCAATTCCTCATAGGTACGATACAAAC
ATGTGAGATATTTACCGCCGCTTGGCTATGGTAATA
1930135
1930136
GTTTCAATTCCTCATAGGTACGATACAAAC
TTTTTTGAAGCATAATCCGCTTGAAAATCAAAATCAAG
1930203
1930204
GTTTCAATTCCTCATAGGTACGATACAAAC
TCCAACAGCACCAGAACTTCTATTAGAAGCCCAACTTA
1930271
1930272
GTTTCAATTCCTCATAGGTACGATACAAAC
TTTGGATGAACGGACTTGGGATGAGATGCCGGAAACT
1930338
1930339
GTTTCAATTCCTCATAGGTACGATACAAAC
CATACAGTTGTAAAGTGTTCACCCATTCCCGCCTTGT
1930405
1930406
GTTTCAATTCCTCATAGGTACGATACAAAC
GTTATTATAGGGAGATTCAATATCTCCCTATAAACTAA
1930473
1930474
GTTTCAATTCCTCATAGGTACGATACAAAC
CACCAGAAGATATACCAGCCGATGTAGTATCTGCAA
1930539
1930540
GTTTCAATTCCTCATAGGTACGATACAAAC
TATTTCTCCTTGTTCACTTCCGATTGTGCCTATTCT
1930605
1930606
GTTTCAATTCCTCATAGGTACGATACAAAC
TCCTTTTCTAGCCACCGTGGTATGTAGTATGGGCCA
1930671
1930672
GTTTCAATTCCTCATAGGTACGATACAAAC
CCGCAAGTATTTTCGCAATTTCACTCTTGGTCATTGA
1930738
1930739
GTTTCAATTCCTCATAGGTACGATACAAAC
TATCACATGAAACTATCATTGGTCAACATCCTTGGAT
1930805
1930806
GTTTCAATTCCTCATAGGTACGATACAAAC
GTATTAGTGGATGTTTACAGAAAAACAGATTGAGGA
1930871
1930872
GTTTCAATTCCTCATAGGTACGATACAAAC
GAGCAGAAAAAATAAGAGTATGTGAATTTTTAGAACGTTGGC
1930943
1930944
GTTTCAATTCCTCATAGGTACGATACAAAC
GATAGGTTGGTCATAGGGCAGAAAGCTGGTGTTGAATGT
1931012
1931013
GTTTCAATTCCTCATAGGTACGATACAAAC
GTGGTACGTTCTGCCATACCATTTAGCCTTATACTC
1931078
1931079
GTTTCAATTCCTCATAGGTACGATACAAAC
CTTCATTATCAGTTGGTAGTGTTCAAGTCAATACAAT
1931145
1931146
GTTTCAATTCCTCATAGGTACGATACAAAC
CTACGGGCATTTCTCCTAACTCGTAGCTCTGTTGCT
1931211
1931212
GTTTCAATTCCTCATAGGTACGATACAAAC
CTGATATAATCATTCAATTTCATAGCTTTATTTACA
1931277
1931278
GTTTCAATTCCTCATAGGTACGATACAAAC
GTTTCCATCAATACTAATAGAAAGAGTCTCAGTGTCTT
1931345
1931346
GTTTCAATTCCTCATAGGTACGATACAAAC
CATGGTACCGGTATCAAAAGGCATTACCTGACTTGCAA
1931413
1931414
GTTTCAATTCCTCATAGGTACGATACAAAC
TCTTTCCTCCTGTCGACGTCTACGTCGAACAGTCGG
1931479
1931480
GTTTCAATTCCTCATAGGTACGATACAAAC
ATTACATCCGGTATGTAGCATAGGGAGGCTGAACGA
1931545
1931546
GTTTCAATTCCTCATAGGTACGATACAAAC
ATGTCAAGCCCGATGGCACTGACTACCATCCCGGAAGTG
1931614
1931615
GTTTCAATTCCTCATAGGTACGATACAAAC
TATCACGGTGCAAGATCTGTATTGATATGGTATAGCT
1931681
1931682
GTTTCAATTCCTCATAGGTACGATACAAAC
TGTTCCGGCTTCTAGTGTTACCGGAGGATCATTTAA
1931747
1931748
GTTTCAATTCCTCATAGGTACGATACAAAC
TTGGTCAAGGTGTTGACGAGGACAAAGACAAAATTGG
1931814
1931815
GTTTCAATTCCTCATAGGTACGATACAAAC
TCGTTGTTCGAATGACTTGAACCTTCATTTTGGGGTATT
1931883
1931884
GTTTCAATTCCTCATAGGTACGATACAAAC
CAGGCGCAAACATACAACGTCCAGGGTTTAAACTTT
1931949
1931950
GTTTCAATTCCTCATAGGTACGATACAAAC
TCTAGCCCTATACATATCATACCGCCACCTCCACAT
1932015
1932016
GTTTCAATTCCTCATAGGTACGATACAAAC
ATGGCAATTCTAAAAGCTGCTTATCCCAATTTCTA
1932080
1932081
GTTTCAATTCCTCATAGGTACGATACAAAC
GAACAATCCGACCAGTGGCAGTAGAAGTTTGTTTTA
1932146
1932147
GTTTCAATTCCTCATAGGTACGATACAAAC
TTACAGAGTTCAAACAGATTCTGGGAGCTACGTATA
1932212
1932213
GTTTCAATTCCTCATAGGTACGATACAAAC
CCATACACTATGTACAAAAACCCAACTATTATCCTT
1932278
1932279
GTTTCAATTCCTCATAGGTACGATACAAAC
GGATTTTTATAGTCGGTTATACGGTACACGTTAGTA
1932344
1932345
GTTTCAATTCCTCATAGGTACGATACAAAC
GGTGCTAGGAATGATTTGGCTGATTTATACTCTATGA
1932411
1932412
GTTTCAATTCCTCATAGGTACGATACAAAC
TTTCTGACTATCGTCAAGCAACCAAAGAGAGTCATCGG
1932479
1932480
GTTTCAATTCCTCATAGGTACGATACAAAC
TTCTGAATGGAACAATTTTGCAAGAACATTGAATACCAG
1932548
1932549
GTTTCAATTCCTCATAGGTACGATACAAAC
TAATGGAACTGAATGCCGGTGAGTATAGCCTAAATAT
1932615
1932616
GTTTCAATTCCTCATAGGTACGATACAAAC
GTCTTTGCAGTTTACGCCCGAAATACCAAAGAGGCGA
1932682
1932683
GTTTCAATTCCTCATAGGTACGATACAAAC
TAATACATAATCATAAATTCAAAAAAGTGGGTTTAA
1932748
1932749
GTTTCAATTCCTCATAGGTACGATACAAAC
TGAGTATTTTGAAAGAGTAGTTCTGAATGTTTATCC
1932814
1932815
GTTTCAATTCCTCATAGGTACGATACAAAC
CAAGGAAGGAATACTGGGACGACGAAAAACAGAGGTT
1932881
1932882
GTTTCAATTCCTCATAGGTACGATACAAAC
TTCTCTGAATTCTTCATTCGTCTTCCAAAGATGCACTA
1932949
1932950
GTTTCAATTCCTCATAGGTACGATACAAAC
TCGTCTATTACCACAACAGTACCATAAATGTCATTAT
1933016
1933017
GTTTCAATTCCTCATAGGTACGATACAAAC
CAAAATCCAATGCGCCTCTCCGTATGGCATCCAACA
1933082
1933083
GTTTCAATTCCTCATAGGTACGATACAAAC
CCATCAAACGTGTAAATGCCTAGCCATATTCTGAGCA
1933149
1933150
GTTTCAATTCCTCATAGGTACGATACAAAC
TATCCCCCTTATTACCCTTACTCACTTCCTGAAGAA
1933215
1933216
GTTTCAATTCCTCATAGGTACGATACAAAC
1933245
Left flanking sequence : Till position 1930002 (length
bp)
AATATAAAGCCTTAACCTTATTATACAGTCCTATTCATTTTCGCTTAAGGCTTTATACTATAAAACCATA
TATAACATTAGGAACTTGGAGTAGCCAGAA
Right flanking sequence : From position 1933245 (length
bp)
CCCATAGAACCTGCATAATTCCTACTTTTTATTTTAATAACATATAAAATAAAAATCAATAACAAAAATA
AAAAAAATCACTCAAACTATTCATAATCCT
Print the CRISPR sequence : From position
bp To position
bp