Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation


Other Tools


GPMS Links





NC_017304_4                                                                                                                 top


Strain : Clostridium thermocellum DSM 1313 RefSeq :NC_017304 (chromosome circular)
CRISPR id : NC_017304_4
DR consensus (30 bp) : GTTTCAATTCCTCATAGGTACGATACAAACNumber of repetitions :49
Begin Position : 1930002 End Position : 1933245

1930002ATTTCAATTCCTCATAGGTACGATACAAACGACTGAATCAAGACAACATTATTGTCGATGCTATTACA 1930069
1930070ATTTCAATTCCTCATAGGTACGATACAAACATGTGAGATATTTACCGCCGCTTGGCTATGGTAATA 1930135
1930136GTTTCAATTCCTCATAGGTACGATACAAACTTTTTTGAAGCATAATCCGCTTGAAAATCAAAATCAAG 1930203
1930204GTTTCAATTCCTCATAGGTACGATACAAACTCCAACAGCACCAGAACTTCTATTAGAAGCCCAACTTA 1930271
1930272GTTTCAATTCCTCATAGGTACGATACAAACTTTGGATGAACGGACTTGGGATGAGATGCCGGAAACT 1930338
1930339GTTTCAATTCCTCATAGGTACGATACAAACCATACAGTTGTAAAGTGTTCACCCATTCCCGCCTTGT 1930405
1930406GTTTCAATTCCTCATAGGTACGATACAAACGTTATTATAGGGAGATTCAATATCTCCCTATAAACTAA 1930473
1930474GTTTCAATTCCTCATAGGTACGATACAAACCACCAGAAGATATACCAGCCGATGTAGTATCTGCAA 1930539
1930540GTTTCAATTCCTCATAGGTACGATACAAACTATTTCTCCTTGTTCACTTCCGATTGTGCCTATTCT 1930605
1930606GTTTCAATTCCTCATAGGTACGATACAAACTCCTTTTCTAGCCACCGTGGTATGTAGTATGGGCCA 1930671
1930672GTTTCAATTCCTCATAGGTACGATACAAACCCGCAAGTATTTTCGCAATTTCACTCTTGGTCATTGA 1930738
1930739GTTTCAATTCCTCATAGGTACGATACAAACTATCACATGAAACTATCATTGGTCAACATCCTTGGAT 1930805
1930806GTTTCAATTCCTCATAGGTACGATACAAACGTATTAGTGGATGTTTACAGAAAAACAGATTGAGGA 1930871
1930872GTTTCAATTCCTCATAGGTACGATACAAACGAGCAGAAAAAATAAGAGTATGTGAATTTTTAGAACGTTGGC 1930943
1930944GTTTCAATTCCTCATAGGTACGATACAAACGATAGGTTGGTCATAGGGCAGAAAGCTGGTGTTGAATGT 1931012
1931013GTTTCAATTCCTCATAGGTACGATACAAACGTGGTACGTTCTGCCATACCATTTAGCCTTATACTC 1931078
1931079GTTTCAATTCCTCATAGGTACGATACAAACCTTCATTATCAGTTGGTAGTGTTCAAGTCAATACAAT 1931145
1931146GTTTCAATTCCTCATAGGTACGATACAAACCTACGGGCATTTCTCCTAACTCGTAGCTCTGTTGCT 1931211
1931212GTTTCAATTCCTCATAGGTACGATACAAACCTGATATAATCATTCAATTTCATAGCTTTATTTACA 1931277
1931278GTTTCAATTCCTCATAGGTACGATACAAACGTTTCCATCAATACTAATAGAAAGAGTCTCAGTGTCTT 1931345
1931346GTTTCAATTCCTCATAGGTACGATACAAACCATGGTACCGGTATCAAAAGGCATTACCTGACTTGCAA 1931413
1931414GTTTCAATTCCTCATAGGTACGATACAAACTCTTTCCTCCTGTCGACGTCTACGTCGAACAGTCGG 1931479
1931480GTTTCAATTCCTCATAGGTACGATACAAACATTACATCCGGTATGTAGCATAGGGAGGCTGAACGA 1931545
1931546GTTTCAATTCCTCATAGGTACGATACAAACATGTCAAGCCCGATGGCACTGACTACCATCCCGGAAGTG 1931614
1931615GTTTCAATTCCTCATAGGTACGATACAAACTATCACGGTGCAAGATCTGTATTGATATGGTATAGCT 1931681
1931682GTTTCAATTCCTCATAGGTACGATACAAACTGTTCCGGCTTCTAGTGTTACCGGAGGATCATTTAA 1931747
1931748GTTTCAATTCCTCATAGGTACGATACAAACTTGGTCAAGGTGTTGACGAGGACAAAGACAAAATTGG 1931814
1931815GTTTCAATTCCTCATAGGTACGATACAAACTCGTTGTTCGAATGACTTGAACCTTCATTTTGGGGTATT 1931883
1931884GTTTCAATTCCTCATAGGTACGATACAAACCAGGCGCAAACATACAACGTCCAGGGTTTAAACTTT 1931949
1931950GTTTCAATTCCTCATAGGTACGATACAAACTCTAGCCCTATACATATCATACCGCCACCTCCACAT 1932015
1932016GTTTCAATTCCTCATAGGTACGATACAAACATGGCAATTCTAAAAGCTGCTTATCCCAATTTCTA 1932080
1932081GTTTCAATTCCTCATAGGTACGATACAAACGAACAATCCGACCAGTGGCAGTAGAAGTTTGTTTTA 1932146
1932147GTTTCAATTCCTCATAGGTACGATACAAACTTACAGAGTTCAAACAGATTCTGGGAGCTACGTATA 1932212
1932213GTTTCAATTCCTCATAGGTACGATACAAACCCATACACTATGTACAAAAACCCAACTATTATCCTT 1932278
1932279GTTTCAATTCCTCATAGGTACGATACAAACGGATTTTTATAGTCGGTTATACGGTACACGTTAGTA 1932344
1932345GTTTCAATTCCTCATAGGTACGATACAAACGGTGCTAGGAATGATTTGGCTGATTTATACTCTATGA 1932411
1932412GTTTCAATTCCTCATAGGTACGATACAAACTTTCTGACTATCGTCAAGCAACCAAAGAGAGTCATCGG 1932479
1932480GTTTCAATTCCTCATAGGTACGATACAAACTTCTGAATGGAACAATTTTGCAAGAACATTGAATACCAG 1932548
1932549GTTTCAATTCCTCATAGGTACGATACAAACTAATGGAACTGAATGCCGGTGAGTATAGCCTAAATAT 1932615
1932616GTTTCAATTCCTCATAGGTACGATACAAACGTCTTTGCAGTTTACGCCCGAAATACCAAAGAGGCGA 1932682
1932683GTTTCAATTCCTCATAGGTACGATACAAACTAATACATAATCATAAATTCAAAAAAGTGGGTTTAA 1932748
1932749GTTTCAATTCCTCATAGGTACGATACAAACTGAGTATTTTGAAAGAGTAGTTCTGAATGTTTATCC 1932814
1932815GTTTCAATTCCTCATAGGTACGATACAAACCAAGGAAGGAATACTGGGACGACGAAAAACAGAGGTT 1932881
1932882GTTTCAATTCCTCATAGGTACGATACAAACTTCTCTGAATTCTTCATTCGTCTTCCAAAGATGCACTA 1932949
1932950GTTTCAATTCCTCATAGGTACGATACAAACTCGTCTATTACCACAACAGTACCATAAATGTCATTAT 1933016
1933017GTTTCAATTCCTCATAGGTACGATACAAACCAAAATCCAATGCGCCTCTCCGTATGGCATCCAACA 1933082
1933083GTTTCAATTCCTCATAGGTACGATACAAACCCATCAAACGTGTAAATGCCTAGCCATATTCTGAGCA 1933149
1933150GTTTCAATTCCTCATAGGTACGATACAAACTATCCCCCTTATTACCCTTACTCACTTCCTGAAGAA 1933215
1933216GTTTCAATTCCTCATAGGTACGATACAAAC1933245
Left flanking sequence : Till position 1930002 (length bp)
AATATAAAGCCTTAACCTTATTATACAGTCCTATTCATTTTCGCTTAAGGCTTTATACTATAAAACCATA
TATAACATTAGGAACTTGGAGTAGCCAGAA
Right flanking sequence : From position 1933245 (length bp)
CCCATAGAACCTGCATAATTCCTACTTTTTATTTTAATAACATATAAAATAAAAATCAATAACAAAAATA
AAAAAAATCACTCAAACTATTCATAATCCT

Print the CRISPR sequence : From position bp To position bp