Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_017450_2                                                                                                                 top


Strain : Francisella cf. novicida Fx1 RefSeq :NC_017450 (chromosome circular)
CRISPR id : NC_017450_2
DR consensus (36 bp) : ATCTACAACAGTAGAAATTATTTAAAGTTCTTAGACNumber of repetitions :7
Begin Position : 1468174 End Position : 1468596

1468174AATAATATAAAGACAAATTATTTAAAGTTCTTAGACGTAAACACTCCAGTTAAGTAATAATCCAT 1468238
1468239ATCTACAACAGTAGAAATTATTTAAAGTTCTTAGACAAATGTTTGAAAAAACGACAGAAGTGTTT 1468303
1468304ATCTACAACAGTAGAAATTATTTAAAGTTCTTAGACAGTAGCTATTTGACCGAACGTACCCTTAT 1468368
1468369ATCTACAACAGTAGAAATTATTTAAAGTTCTTAGACCTACTTACTGGTTATTACGCTACGTTAG 1468432
1468433ATCTACAACAGTAGAAATTATTTAAAGTTCTTAGACTTGGAAGAATATGCCAGTCCATATGTTA 1468496
1468497ATCTACAACAGTAGAAATTATTTAAAGTTCTTAGACTTTGGAGTGGTTATTATGAAGAGATGGC 1468560
1468561ATCTACAACAGTAGAAATTATTTAAAGTTCTTAGAC1468596
Left flanking sequence : Till position 1468174 (length bp)
GAAGCTTTACTAGCATTATCTTTCATCTGCATTAAATCCATTTTTATAAGCCTTTAAATTCCGAAGTAGA
TTTATATTAGCAAATTCTAATTTAGAAATC
Right flanking sequence : From position 1468596 (length bp)
CCGTTTTTGCCTAAATCAGCAAAAAAAGACCTAAAATCTATGATTTTTTTAGCATTTTGATATATAACAA
CAGTCATATTTTTAAATATCTCTAAGAACT
Print the CRISPR sequence : From position bp To position bp