CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_017467_1
Flanking alignement tool
Page manual
  
Home Page
NC_017467_1                                                                                                                 
top
Strain :
Lactobacillus helveticus H10
RefSeq :
NC_017467 (chromosome circular)
CRISPR id :
NC_017467_1
DR consensus (32 bp) :
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
Number of repetitions :
41
Begin Position :
578826
End Position :
581519
578826
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
GGTCAACGATGTTAAAGCAGCCAATCCTTATGAT
578891
578892
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
TTTAGTATCCATAGCCTGTAAGTCCTCCATCCACAA
578959
578960
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
TTCTAAGCAAAATAAAAGCCACCCGAAGGTGGCA
579025
579026
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
TTTGAAGTCCTGTGCCTGCGAACTGGTCAGTATAC
579092
579093
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
GTATGGGAACTTTTATCATAATCACTCTTGTTAA
579158
579159
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
AAGAAGATACTGCCTGACCGGTTCCACATTAGCA
579224
579225
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
ATGTAGTGAGTGGCTTTACCATCAGCTCTCATAAC
579291
579292
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
AAAACGAGCTTAAAGCGCCAAAAAACCAATGGAA
579357
579358
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
ATCAAGATTGTAGTTGCGCATTAGGAATTGTTTTT
579424
579425
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
ATTTGAATATGCACGCAGATGATGATGGCTTTTT
579490
579491
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
ATATCTCAATATCAGCTCCCTCCAAATATATTAAG
579557
579558
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
ACTTCGCCAACAGCCTTTTCAACCGCGCTATTAA
579623
579624
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
AAATATGATGATCCAAACGGTGGCGACAACGGACA
579690
579691
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
TTTAAAGACATCGTAGCACCGGCTGAAACTGATC
579756
579757
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
ATGATGGGCTACCAGTATCCAACACATTGTCTAA
579822
579823
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
AATCGAAAGCTCAATATATCCCTGTGAAATAAC
579887
579888
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
CGTTCTGCTGAAGAAATTGCTTTACTAATTCTCT
579953
579954
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
TCCGTATGGAATATCGGATAGCGCTTGAACACCAG
580020
580021
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
CGCTCTTGCCATATTTCGTAATTGCATATCGAGA
580086
580087
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
CTATTGCGTTGTTCATCGCAATAAGATGTAGGGT
580152
580153
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
TATCACAGAAAGCAACACTGCTACTTGGCATTCAA
580219
580220
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
AAAAGGTGAACCACATCAAGAATCCAAACAAGAT
580285
580286
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
AAACCAAGCCATGCCTGATGCTGTATAAGCATCC
580351
580352
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
ATAAAGGTCTTTAAGACCAGTACCATTAGCAAAG
580417
580418
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
TTGGTTACGACTCTGACAAAAGCAAGAAATCAGA
580483
580484
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
GTTTGTATTGCTTAACAATATGACCAAAAATTTT
580549
580550
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
AGTTGTTTGTTGATTAGTTACAGTTTTAGTAGTT
580615
580616
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
AAAGAACATAGTTTGCAGAACTGTTTCCAAGTAAA
580682
580683
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
TCTAAGAACTCTGAAACAGTGTGCTTGATCCAGTGC
580750
580751
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
GGCTTTAGATGCGTCAAATGCCGCCTGTGGGCTATC
580818
580819
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
ATATACTTGAGAGCCCCACCTTGAGTTTTGCCAAA
580885
580886
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
AAAAATTGTTAAATGCAGGATGGAGCTAGACTATG
580952
580953
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
ATTGATGGAAAATAGCCAAAGTCAGGGCTATCAA
581018
581019
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
CCTCCTAGATTTCTGCCAGTGAGCATTGTGTCTGTG
581086
581087
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
ATATAGCACATTAAGGCATGACCGAGTTAATATC
581152
581153
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
GCCTTCCTTGACCACATGTGCTTGACAGCCGGTATA
581220
581221
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
CAAAAGAACCAGTTCACGTGCCAACAGGTAAGTAA
581287
581288
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
ACTGCTAAGGGCAAACCATTGGACTTGCTTAAACA
581354
581355
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
ATCAAGCTTGCCAACGGGTCGATTTTATTCTGTGA
581421
581422
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
TTTTGAATAGATGGCATGTAAGTCTGATATAGTT
581487
581488
GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
581519
Left flanking sequence : Till position 578826 (length
bp)
TGAAAAGTGATCTTTTGATAAAAAATATATTTTTATCAGGGTAAGTTAATTTGAAGCCCAATATTTAGAA
ATGAATTGAAATCATGATCTAAATATTGCG
Right flanking sequence : From position 581519 (length
bp)
TTTAGGTCCATTGCACTCTTGCCAGTGAAGTCGTGTCGCACTCCTTGTGATGCACTTGTGGGTGTATTAG
TCGGCTTCTTCAACCCAGGCTTGAAGTACT
Print the CRISPR sequence : From position
bp To position
bp