Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_017566_5                                                                                                                 top


Strain : Shewanella putrefaciens 200 RefSeq :NC_017566 (chromosome circular)
CRISPR id : NC_017566_5
DR consensus (28 bp) : TTTCTAAGCCGCCTGTGCGGCGGTGAACNumber of repetitions :86
Begin Position : 2466805 End Position : 2471935

2466805TCTACAAGCCGCCAGTGCGGCGGTGAACTTAAAGCCGCGTGTGCGGCTATTCAGATTTAC 2466864
2466865TTTCTAAGCCGCCTGTGCGGCGGTGAACTGATCGAGTACAGCGGCATTGCCGAGTTAACG 2466924
2466925TTTCTAAGCCGCCTGTGCGGCGGTGAACTTACGATTGCTTTTTTAGCGCCCTTTGAATCT 2466984
2466985TTTCTAAGCCGCCTGTGCGGCGGTGAACACTGGGTTTACTGCTGGCGTCGGGGTGGCTGT 2467044
2467045TTTCTAAGCCGCCTGTGCGGCGGTGAACGAATACATCTTCCGCACCCAACGAGCCGCGGC 2467104
2467105TTTCTAAGCCGCCTGTGCGGCGGTGAACAGTAGCGGTTTACGCTCACCCGTTGGCACTAT 2467164
2467165TTTCTAAGCCGCCTGTGCGGCGGTGAACCCGTTTGTGGCTACAGGGAAATGCTCACGGCG 2467224
2467225TTTCTAAGCCGCCTGTGCGGCGGTGAACAATCTTAGTCGTGTTTTAGATTTTAATTGCGA 2467284
2467285TTTCTAAGCCGCCTGTGCGGCGGTGAACGGTAAACTAGCTGAACCGCTAGCGGATAACGT 2467344
2467345TTTCTAAGCCGCCTGTGCGGCGGTGAACTCTTGCGCCCAAGCGGTTTATCGTTAACAACT 2467404
2467405TTTCTAAGCCGCCTGTGCGGCGGTGAACATCAATCGTAGCTTCATCGCCATTCTTGATTA 2467464
2467465TTTCTAAGCCGCCTGTGCGGCGGTGAACCCAGAATCTACGTTCGACGAAATAGCTAATGT 2467524
2467525TTTCTAAGCCGCCTGTGCGGCGGTGAACCCACAGGTATCGATTACAGAGTAAGCCTCCAA 2467584
2467585TTTCTAAGCCGCCTGTGCGGCGGTGAACCTTTATCGTCCGTTGTTGACTGTCATAATTGC 2467644
2467645TTTCTAAGCCGCCTGTGCGGCGGTGAACTAGAGCGTGGTCGCAATCTTATATGCCAGTAC 2467704
2467705TTTCTAAGCCGCCTGTGCGGCGGTGAACTTAAAATTTTAGGGTCATTCGGTAATGCTGAA 2467764
2467765TTTCTAAGCCGCCTGTGCGGCGGTGAACGTGCAGGTTAACGAAGTGGTGCTTGAGCCAAA 2467824
2467825TTTCTAAGCCGCCTGTGCGGCGGTGAACATGACAATGGCGCGGCCAGAGTTAGGGCGAAT 2467884
2467885TTTCTAAGCCGCCTGTGCGGCGGTGAACAACAAGTTGAGCGCTCTGTCGCTCAATTAATC 2467944
2467945TTTCTAAGCCGCCTGTGCGGCGGTGAACTATAATGCCCTCGATATTACGCAAAACAAAAT 2468004
2468005TTTCTAAGCCGCCTGTGCGGCGGTGAACACTGCGCACAATGTATATTAATTAGTCTGCTA 2468064
2468065TTTCTAAGCCGCCTGTGCGGCGGTGAACTGGGCGAATATCGCTCACAATGTGAGTGTGGT 2468124
2468125TTTCTAAGCCGCCTGTGCGGCGGTGAACTTGCATGTGGTGAAAAGTGGAAAGACCAACAA 2468184
2468185TTTCTAAGCCGCCTGTGCGGCGGTGAACCAATCAGCGCAACAGCGACCAGCACAAAATCA 2468244
2468245TTTCTAAGCCGCCTGTGCGGCGGTGAACGGCACTATGGGAAAACGTGCCGCTAACTTTGA 2468304
2468305TTTCTAAGCCGCCTGTGCGGCGGTGAACAGGTCAGTGCCTTCACTCTCGGTGTAGTGTTA 2468364
2468365TTTCTAAGCCGCCTGTGCGGCGGTGAACTGCAAAGATGACCACAAACGTTACATTCTATC 2468424
2468425TTTCTAAGCCGCCTGTGCGGCGGTGAACACCCACCAAAGAAAGTCTTTTAGAAAAGAAAC 2468484
2468485TTTCTAAGCCGCCTGTGCGGCGGTGAACCATCAACTTTTTTATCTTCAAGAGAAGGTAAA 2468544
2468545TTTCTAAGCCGCCTGTGCGGCGGTGAACAATGTTGAGTATGTGGATAAGAGGTTTTTAGT 2468604
2468605TTTCTAAGCCGCCTGTGCGGCGGTGAACTTCTTGCAAAATGCGCTTTATCTAAAATCAAT 2468664
2468665TTTCTAAGCCGCCTGTGCGGCGGTGAACAGGCACAAATAATAGTCCGCAACTCAGCTATT 2468724
2468725TTTCTAAGCCGCCTGTGCGGCGGTGAACGATTAACCCTTTTGAAGTTGTCTTAGCTCCTT 2468784
2468785TTTCTAAGCCGCCTGTGCGGCGGTGAACAAAATATATGAAATTAAGTAGCCGACAAAAAA 2468844
2468845TTTCTAAGCCGCCTGTGCGGCGGTGAACCTGTGTACTCGACCATCTGCCCAGCGTTGCGA 2468904
2468905TTTCTAAGCCGCCTGTGCGGCGGTGAACCGTTATACGCGCTATCCCCCCATAAATTTTTA 2468964
2468965TTTCTAAGCCGCCTGTGCGGCGGTGAACACCAAACGATCACTGATAAAAAGTTTATTCAA 2469024
2469025TTTCTAAGCCGCCTGTGCGGCGGTGAACAATTAATGGAAAAAGGTAACAACTCCATTGAA 2469084
2469085TTTCTAAGCCGCCTGTGCGGCGGTGAACCATAGGCGATTCTAAGTCCTGAGAATCTAAAT 2469144
2469145TTTCTAAGCCGCCTGTGCGGCGGTGAACACAGAGGGGATAGGCGGGGTATCTAACCGCACA 2469205
2469206TTTCTAAGCCGCCTGTGCGGCGGTGAACATGGATCTGAACCGCAAGAAGATAATGCAGAA 2469265
2469266TTTCTAAGCCGCCTGTGCGGCGGTGAACGTGGCTCAGTGCCAACAAACAGGCGATCTAAC 2469325
2469326TTTCTAAGCCGCCTGTGCGGCGGTGAACGGAACTGATTATAACTATCGACTGATTTACGA 2469385
2469386TTTCTAAGCCGCCTGTGCGGCGGTGAACATGAAAACGCAAAGGGCATGCCGTCAATCAAT 2469445
2469446TTTCTAAGCCGCCTGTGCGGCGGTGAACGCGATAGTGTGGGCAATTCATTATTAAGAATA 2469505
2469506TTTCTAAGCCGCCTGTGCGGCGGTGAACAAAAAATCTATCATGGAAAGCGACAACTTTAA 2469565
2469566TTTCTAAGCCGCCTGTGCGGCGGTGAACAAAAAGAAATGAAATGCAAACTAAAACTTAAA 2469625
2469626TTTCTAAGCCGCCTGTGCGGCGGTGAACCACTAAACTTCCAACTCTAGAGCACGCGCTAA 2469685
2469686TTTCTAAGCCGCCTGTGCGGCGGTGAACCCATGTCAGACATGATGGCTCGCCAGATGTTA 2469745
2469746TTTCTAAGCCGCCTGTGCGGCGGTGAACGGCCGAGTGCATAGCGATAGCATCTTGATCAT 2469805
2469806TTTCTAAGCCGCCTGTGCGGCGGTGAACAAGTCACTAAAACATTACAAACTTCATCTGGT 2469865
2469866TTTCTAAGCCGCCTGTGCGGCGGTGAACCAGTTGATACGAGCATAATGATTCGCAAAAAA 2469925
2469926TTTCTAAGCCGCCTGTGCGGCGGTGAACGCATCGGCCATTTTTTTACCGTCGGTTTTAAA 2469985
2469986TTTCTAAGCCGCCTGTGCGGCGGTGAACAGTCATACAGCTTTAGTTGCCTATATCAATAC 2470045
2470046TTTCTAAGCCGCCTGTGCGGCGGTGAACACCCCGTCAATAACTCGATAACTTGTGGTTCT 2470105
2470106TTTCTAAGCCGCCTGTGCGGCGGTGAACCGCTATAAAAATCAAGCATTTCAGACAATCGA 2470165
2470166TTTCTAAGCCGCCTGTGCGGCGGTGAACGAGTGAATGCACTATTACTTTCTATCTTAGTT 2470225
2470226TTTCTAAGCCGCCTGTGCGGCGGTGAACAATATTTCTAAGGTTCACCAAAAAGCATTCAA 2470285
2470286TTTCTAAGCCGCCTGTGCGGCGGTGAACAATGAGCTTGTATCTGCATTAGACGATGACCA 2470345
2470346TTTCTAAGCCGCCTGTGCGGCGGTGAACCTTACAAATGCAAAGAGTAGCCGTAAGTCAAA 2470405
2470406TTTCTAAGCCGCCTGTGCGGCGGTGAACATGGCCGATAAGTTTGGCTTAAGTACCGTTGA 2470465
2470466TTTCTAAGCCGCCTGTGCGGCGGTGAACATGCAGTTTGCCTTTGCAATCCAGTTTGATACA 2470526
2470527TTTCTAAGCCGCCTGTGCGGCGGTGAACCGTAAAAGATATCGATAATGTCAGTGCAATAG 2470586
2470587TTTCTAAGCCGCCTGTGCGGCGGTGAACGAGTATTTAACATGGCTTTACCTGCGATTTTA 2470646
2470647TTTCTAAGCCGCCTGTGCGGCGGTGAACCTGTTACAGCAATGCCCGAGATACCAAAAAAA 2470706
2470707TTTCTAAGCCGCCTGTGCGGCGGTGAACATAAACCTTGGCTATGTGAGTGCTACCCGAAC 2470766
2470767TTTCTAAGCCGCCTGTGCGGCGGTGAACGTAAATTCCAAAGACGGACAGTTTCTATTTTA 2470826
2470827TTTCTAAGCCGCCTGTGCGGCGGTGAACTTGGTCTATTTGGCTTTATAAACTTGTAAAAA 2470886
2470887TTTCTAAGCCGCCTGTGCGGCGGTGAACCTGCGCAATGACCCGCGCTTAGTTGTGTTAGT 2470946
2470947TTTCTAAGCCGCCTGTGCGGCGGTGAACAAAAAAGCCGGTAGCATGGCGAGCAGGTTATA 2471006
2471007TTTCTAAGCCGCCTGTGCGGCGGTGAACACAACAAAAACTGTACGTTTAATGCAGTTACT 2471066
2471067TTTCTAAGCCGCCTGTGCGGCGGTGAACATGATGATTATTCGTCTAGCTATGAGCTAGTT 2471126
2471127TTTCTAAGCCGCCTGTGCGGCGGTGAACTCAGTTACTAAAACTATAAGAGACTTACTTAC 2471186
2471187TTTCTAAGCCGCCTGTGCGGCGGTGAACATCAATTGAGTAAAGCCCTAGCTCTTACACTA 2471246
2471247TTTCTAAGCCGCCTGTGCGGCGGTGAACTCGTTTATTCATGTTAATCACTCCTTCATTAA 2471306
2471307TTTCTAAGCCGCCTGTGCGGCGGTGAACTATCGGTCATTATTTTCACACCCATTCTTTAA 2471366
2471367TTTCTAAGCCGCCTGTGCGGCGGTGAACATGACAAGTCTTCATTTAAATCTATCGGCTTGA 2471427
2471428TTTCTAAGCCGCCTGTGCGGCGGTGAACGAGATTCACGCTTTGATGTGAAATTTCCAAGC 2471487
2471488TTTCTAAGCCGCCTGTGCGGCGGTGAACTAGCAACAGAAACCTGTTGAGTATTAGTAGAA 2471547
2471548TTTCTAAGCCGCCTGTGCGGCGGTGAACGGTGATCACTTGCACGGGCGCCCAACTCGATA 2471607
2471608TTTCTAAGCCGCCTGTGCGGCGGTGAACATTGTTGATGGTCATGTCTTGCAGGGCGTAAA 2471667
2471668TTTCTAAGCCGCCTGTGCGGCGGTGAACTAATGACTTCTCGACTTACTTCTTTACTCGTT 2471727
2471728TTTCTAAGCCGCCTGTGCGGCGGTGAACCCGAAGCGCCACCGAATATTTGTTGTGCTGTT 2471787
2471788TTTCTAAGCCGCCTGTGCGGCGGTGAACGAGTCGATAAGTTAGCTTCACATATTCACAAC 2471847
2471848TTTCTAAGCCGCCTGTGCGGCGGTGAACACTGGTCGAGAGCATCATAGAGATTGGTGTCA 2471907
2471908TTTCTAAGCCGCCTGTGCGGCGGTGAAC2471935
Left flanking sequence : Till position 2466805 (length bp)
AAAGTTAAAAGGGAGTTCGAAGCATTATGCTGATTTAAGATAAGACTACAAGTTAACAACGACATTAACG
CCAATATTAGCACTCCCCCTTACCGCTATA
Right flanking sequence : From position 2471935 (length bp)
AATAGAATATCTTCAAAAAAATAAGTTACAACAGGCAGATAGATAAAAATTTACTTTTTTACCTATTGAA
AAACCACCTAATATAACTCATTGTTTTACA
Print the CRISPR sequence : From position bp To position bp