Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation


Other Tools


GPMS Links





NC_017588_3                                                                                                                 top


Strain : Thermus thermophilus JL-18 RefSeq :NC_017588 (plasmid pTTJL1801 ci)
CRISPR id : NC_017588_3
DR consensus (36 bp) : GTTTCAATCCTCTACGAGGCTAACGAGGTTTGCAACNumber of repetitions :8
Begin Position : 77686 End Position : 78229

77686AAAGGGGGGCTCTACGAGGCTAACGAGGTTTGCAACCTACGGGCACCCAAACGTCAAACGCACTGTCTACCCT 77758
77759GTTTCAATCCTCTACGAGGCTAACGAGGTTTGCAACGTGGTGGCGGGCGTGCGCCACCCGGCCTAGGGTGATGGC 77833
77834GTTTCAATCCTCTACGAGGCTAACGAGGTTTGCAACGCTATGTCGGGGCGGGGTACACCGCCCTAGTCCAG 77904
77905GTTTCAATCCTCTACGAGGCTAACGAGGTTTGCAACCGTGGGGAGATTAGTTCGTATGGCCCCCTTTACCTTCTTA 77980
77981GTTTCAATCCTCTACGAGGCTAACGAGGTTTGCAACTCAAAGGGGCCCTGGGGAGCCTCCTGGACCAGCT 78050
78051GTTTCAATCCTCTACGAGGCTAACGAGGTTTGCAACCGCAAAGAGGCCGCCGAGCGCCGGGTGGAAAAAAGG 78122
78123GTTTCAATCCTCTACGAGGCTAACGAGGTTTGCAACAGGCGCTCCCGCTCCCGCTCCAACTCCCGCAAACG 78193
78194GTTTCAATCCTCTACGAGGCTAACGAGGTTTGCAAC78229
Left flanking sequence : Till position 77686 (length bp)
ACGGCCTTTTCCTTTGTGGCCCAAGTTCTAGCCCGGGAGGGCTTGCCTCCCACCTGGGTGGCCAGGGTGG
CAGCGTGAAGGGCCTCGGAGTGAATAACCG
Right flanking sequence : From position 78229 (length bp)
GGCCCCCTCCAGGAAGCGGCTCCAGGCGGGGGGTCTTGAGGCCATTTTCGCACGCGGGGGGATTATGCGT
CAACCTGGAAGAGAAGCCGTGGGACTAAAG

Print the CRISPR sequence : From position bp To position bp