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CRISPRs details
NC_017588_3
Flanking alignement tool
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NC_017588_3                                                                                                                 
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Strain :
Thermus thermophilus JL-18
RefSeq :
NC_017588 (plasmid pTTJL1801 ci)
CRISPR id :
NC_017588_3
DR consensus (36 bp) :
GTTTCAATCCTCTACGAGGCTAACGAGGTTTGCAAC
Number of repetitions :
8
Begin Position :
77686
End Position :
78229
77686
AAAGGGGGGCTCTACGAGGCTAACGAGGTTTGCAAC
CTACGGGCACCCAAACGTCAAACGCACTGTCTACCCT
77758
77759
GTTTCAATCCTCTACGAGGCTAACGAGGTTTGCAAC
GTGGTGGCGGGCGTGCGCCACCCGGCCTAGGGTGATGGC
77833
77834
GTTTCAATCCTCTACGAGGCTAACGAGGTTTGCAAC
GCTATGTCGGGGCGGGGTACACCGCCCTAGTCCAG
77904
77905
GTTTCAATCCTCTACGAGGCTAACGAGGTTTGCAAC
CGTGGGGAGATTAGTTCGTATGGCCCCCTTTACCTTCTTA
77980
77981
GTTTCAATCCTCTACGAGGCTAACGAGGTTTGCAAC
TCAAAGGGGCCCTGGGGAGCCTCCTGGACCAGCT
78050
78051
GTTTCAATCCTCTACGAGGCTAACGAGGTTTGCAAC
CGCAAAGAGGCCGCCGAGCGCCGGGTGGAAAAAAGG
78122
78123
GTTTCAATCCTCTACGAGGCTAACGAGGTTTGCAAC
AGGCGCTCCCGCTCCCGCTCCAACTCCCGCAAACG
78193
78194
GTTTCAATCCTCTACGAGGCTAACGAGGTTTGCAAC
78229
Left flanking sequence : Till position 77686 (length
bp)
ACGGCCTTTTCCTTTGTGGCCCAAGTTCTAGCCCGGGAGGGCTTGCCTCCCACCTGGGTGGCCAGGGTGG
CAGCGTGAAGGGCCTCGGAGTGAATAACCG
Right flanking sequence : From position 78229 (length
bp)
GGCCCCCTCCAGGAAGCGGCTCCAGGCGGGGGGTCTTGAGGCCATTTTCGCACGCGGGGGGATTATGCGT
CAACCTGGAAGAGAAGCCGTGGGACTAAAG
Print the CRISPR sequence : From position
bp To position
bp