Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_018411_3                                                                                                                 top


Strain : Mycoplasma gallisepticum NC06_2006.080-5-2P RefSeq :NC_018411 (chromosome circular)
CRISPR id : NC_018411_3
DR consensus (36 bp) : GTTTTAGCACTGTACAATACTTGTGTAAGCAATAACNumber of repetitions :24
Begin Position : 864033 End Position : 865588

864033GTTTTAGCACTGTACAATACTTGTGTAAGCAATAACATTCTGCCGCCACGATATCGATTTCAGTTC 864098
864099GTTTTAGCACTGTACAATACTTGTGTAAGCAATAACATAAGAACAAGAACTATCTAACGCTTTTTT 864164
864165GTTTTAGCACTGTACAATACTTGTGTAAGCAATAACGTAAGTTGTCGATCTCTTCACTAACGACAG 864230
864231GTTTTAACACTGTACAATACTTGTGTAAGCAATAACTTGTTGAGCTAATTGGACTTAAAGCAAATA 864296
864297GTTTTAGCACTGTACAATACTTGTGTAAGCAATAACTTGAAATTTGAATGTTTGGAAATCTTCACG 864362
864363GTTTTAGCACTGTACAATACTTGTGTAAGCAATAACGCAATAGTTTGTAAGCAAAACGTGGGAGGGG 864429
864430GTTTTAGCACTGTACAATACTTGTGTAAGCAATAACAATTAAAAGTTAAGAACGTTGTTGCTGACG 864495
864496GTTTTAGCACTGTACAATACTTGTGTAAGCAATAACTAGTGTATTTTAACCACCGTTCAAGCGCTC 864561
864562GTTTTAGCACTGTACAATACTTGTGTAAGCAATAACTTTTTTGTTAATGAATTAAAAATCTTATCAG 864628
864629GTTTTAGCACTGTACAATACTTGTGTAAGCAATAACTTTTTTAAGCTCATCTTCAAGGTGTTGATT 864694
864695GTTTTAGCACTGTACAATACTTGTGTAAGCAATAACTTTAAGCGTTCCGATCGTTTGTCAAATGTG 864760
864761GTTTTAGCACTGTACAATACTTGTGTAAGCAATAACAACTTATCTGCATAACCCTTTTGAATCTCT 864826
864827GTTTTAGCACTGTACAATACTTGTGTAAGCAATAACAAGTTGATCATTTAAATGAGCTTTTAAAAA 864892
864893GTTTTAGCACTGTACAATACTTGTGTAAGCAATAACACGTTTGAGGTTCAGCTAATTCTGGGGTTA 864958
864959GTTTTAGCACTGTACAATACTTGTGTAAGCAATAACTAATTAATCGCGATAATACAATGTATTTTG 865024
865025GTTTTAGCACTGTACAATACTTGTGTAAGCAATAACTTTGATCATCGACTGTTCAAAGAAGGCGTA 865090
865091GTTTTAGCACTGTACAATACTTGTGTAAGCAATAACTAGTTAAATTAATTTTTAAAGGATGGTTTA 865156
865157GTTTTAGCACTGTACAATACTTGTGTAAGCAATAACTAATAATCTTAATTTTAGTGTGTTTGTCGT 865222
865223GTTTTAGCACTGTACAATACTTGTGTAAGCAATAACGAATTAAATTATCTTTATAAGTAAAATAAA 865288
865289GTTTTAGCACTGTACAATACTTGTGTAAGCAATAACGTTTTGCTTATAAATTGTTACAAGACTTCT 865354
865355GTTTTAGCACTGTACAATACTTGTGTAAGCAATAACATTCTGCCGCCACGATATCGATTTCTGTTC 865420
865421GTTTTAGCACTGTACAATACTTGTGTAAGCAATAACATGGTGACGAATATAAACCCCAACTTGATC 865486
865487GTTTTAGCACTGTACAATACTTGTGTAAGCAATAACCAACAGCCGTTGTTAAAATTAAAAAAACTA 865552
865553GTTTTAGCACTGTACAATACTTGTGTAAGCAATAAC865588
Left flanking sequence : Till position 864033 (length bp)
CCATTCCCATTGCCCCACTTGGAATGGGATTATGTACCTTAATCTTCCGTAAGAAATTTAATGAAGGTGA
AAAATCACTTGGAATTAGTGCAATCCTAAT
Right flanking sequence : From position 865588 (length bp)
AAAAACAAGTATTTTTTACAAACGAAAAAGTTTTATCATTAAACATATTTAATCTGAAACAAAATTTTGA
AATAAATAAACTTTACTTAATCTTTTGTTT
Print the CRISPR sequence : From position bp To position bp