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CRISPRs details
NC_020125_1
Flanking alignement tool
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NC_020125_1                                                                                                                 
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Strain :
Riemerella anatipestifer RA-CH-2
RefSeq :
NC_020125 (chromosome circular)
CRISPR id :
NC_020125_1
DR consensus (47 bp) :
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
Number of repetitions :
16
Begin Position :
871223
End Position :
872424
871223
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
ACGCTGGGTCCCATCAAGGTCATACGTGGC
871299
871300
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
AGTTTTTCTAAATCCTTAAATATTTTATCT
871376
871377
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
ATCCAAAACGATTTACAGCAGATTGCGAGT
871453
871454
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
GCGATTCCGGTTCAGGCCAGCACCTGGAGA
871530
871531
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
TAGTATTGGGATGTGTTATTTAAAAAGTGT
871607
871608
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
TTTCGGTTGCTATCCGAAACGATTCGGATC
871684
871685
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
GAGGTGTTGTCATATCTCAATCTCGTCTAT
871761
871762
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
TACTTCGTTTATTAGTTTTATTGCAATGTT
871838
871839
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
TAGATACATCTCTTTATCTTCGTGTAAAAT
871915
871916
GTTGCGAATTATCACAAAGATAGTGAAAATTGAAAGCAATTCACAAC
GTCTTTGAGGTAAGGTTTTGTCAAATCCCA
871992
871993
GTTGCGAATTATCACAAAGATAGTGAAAATTGAAAGCAATTCACAAC
TAATGGAGATTATAATATCCAGATACAAAC
872069
872070
GTTGCGAATTATCACAAAGATAGTGAAAATTGAAAGCAATTCACAAC
TCTATCGAAGTGTTTAAAAACACTTGATTT
872146
872147
GTTGCGAATTATCACAAAGATAGTGAAAATTGAAAGCAATTCACAAC
GATATAGTATCAGATGAACCGACAACGGAC
872223
872224
GTTGCGAATTATCACAAAGATAGTGAAAATTGAAAGCAATTCACAAC
TGATTGACTCTATTTTCTCCTGTGCAGATA
872300
872301
GTTGCGAATTATCACAAAGATAGTGAAAATTGAAAGCAATTCACAAC
TTATTAAAAGTTTTCCGATACTTCCTATGT
872377
872378
GTTGCGAACTATCACAAAGATAGTGAAAATTGAAAGCAATTCATAAT
872424
Left flanking sequence : Till position 871223 (length
bp)
AAAAGACTTTACATCAAACAAAAATAGAGAAGAAATAGTAAAAAATCTAATCCTATAAAAACGCAAAACC
CATTGAAAAACAATGGGTTTATTTTTTGAG
Right flanking sequence : From position 872424 (length
bp)
ATTACTGTTTGTTATTGGTTTTATTTTTTAAGATATAAAACACGCTTCCAATTATGTAAACCGACACAAT
TAAATTAGATACTAAATTAAAAATCCCTAT
Print the CRISPR sequence : From position
bp To position
bp