Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation


Other Tools


GPMS Links





NC_020246_3                                                                                                                 top


Strain : Sulfolobus acidocaldarius N8 RefSeq :NC_020246 (chromosome circular)
CRISPR id : NC_020246_3
DR consensus (25 bp) : CTTTCAATCCCTTATGGGATTCTTCNumber of repetitions :5
Begin Position : 1786143 End Position : 1786420

1786143CCTTCAATTTCTTATGGGACTTTTAAATGTGGCTCTCAACATTCATTCAAATGATATATACTTA 1786206
1786207CTTTCAATCCCTTATGGGATTCTTCCTACCTTTTGAGATGCTTTCACCGATCTATGTTAAAGCAAA 1786272
1786273CTTTCAATCCCTTATGGGATTCTTCCTCGTTTTCAATAAATGTCTATAGGGATGAATGTGA 1786333
1786334CTTTCAATCCCTTATGGGATTCTTCGATACGTTGCAGGCAGATGATGAGAGATGATGATATG 1786395
1786396CTTTCAATCCCTTATGGGATTCTTC1786420
Left flanking sequence : Till position 1786143 (length bp)
ATGAACTTCTCCGTAGAGAAATGGGAAAGTAAATAGTTAAAATGTTCATTACTGACCTCTTCTACTCAAT
AATTAAAGTTCTATATAAAAATGAATACGG
Right flanking sequence : From position 1786420 (length bp)
TGATGTATTTATTATTCCCTTATCCTAAATTTGACGTTCTTGTTAATAAACTTTTGCTTAAGCCCCTAAC
TTAATCATGCGACCTTGAATCCTAGTAATT

Print the CRISPR sequence : From position bp To position bp