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CRISPRs details
NC_022084_3
Flanking alignement tool
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NC_022084_3                                                                                                                 
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Strain :
Thermococcus litoralis DSM 5473
RefSeq :
NC_022084 (chromosome circular)
CRISPR id :
NC_022084_3
DR consensus (30 bp) :
GTTCCAATAAGACTTTAAAAGAATTGAAAG
Number of repetitions :
35
Begin Position :
406450
End Position :
408814
406450
GTTCCAATAAGACTTTAAAAGAATTGAAAT
TAGAAAGAAAAGAGGTCAGTGATTTTGTTTCAAGTATAA
406518
406519
GTTCCAATAAGACTTTAAAAGAATTGAAAT
ATATTAAAGATTCCCCTACCGTTAACCCGTCTAAAA
406584
406585
GTTCCAATAAGACTTTAAAAGAATTGAAAT
TCATTAGCCAGATAGACACCATAGAACACCTAAAAAC
406651
406652
GTTCCAATAAGACTTTAAAAGAATTGAAAT
GAATTCGAAGTTTTAGTCGTAAAAGACAAAGAAGAAG
406718
406719
GTTCCAATAAGACTTTAAAAGAATTGAAAT
TCAACGAACCAACACCATACACCACGAACGTACCCCT
406785
406786
GTTCCAATAAGACTTTAAAAGAATTGAAAT
CACGTGATAACATAGTCCCCGCGGCGGGGTCGTTAAATA
406854
406855
GTTCCAATAAGACTTTAAAAGAATTGAAAT
TTTCCATACAGTTGACCGGGAATTCCCCCTTATGTTAG
406922
406923
GTTCCAATAAGACTTTAAAAGAATTGAAAT
TTTCTCGAAATTGATTTTTAAGCCCACGTGGGCGTAGTAA
406992
406993
GTTCCAATAAGACTTTAAAAGAATTGAAAT
AATAAATTCTACTACTTCGTCAAGTACATTTTACAA
407058
407059
GTTCCAATAAGACTTTAAAAGAATTGAAAT
CGAATTTTCGGGCGTATTCTTCTATTAGCTCTATCACT
407126
407127
GTTCCAATAAGACTTTAAAAGAATTGAAAT
TATTTTATGGCAGTGACTTAATAAGCGTTAGGTTTTGCCGGAA
407199
407200
GTTCCAATAAGACTTTAAAAGAATTGAAAT
TGATAAACCCCCCTGTATTTGCCGCCCCGAACCGGTG
407266
407267
GTTCCAATAAGACTTTAAAAGAATTGAAAT
TAAAATACATTGACCTAGAACTTTTAAGCATGCTAGAAAA
407336
407337
GTTCCAATAAGACTTTAAAAGAATTGAAAT
AAAATAACGGGGTTCACGTGAATGTTTAGCCCCTTTT
407403
407404
GTTCCAATAAGACTTTAAAAGAATTGAAAT
ATTGCACCCGTATTATTTCCCTTTGTGTCGTCCATGCTTC
407473
407474
GTTCCAATAAGACTTTAAAAGAATTGAAAT
TTATTTAACCCATTTAAACCCATTTAATACGGCTTTTC
407541
407542
GTTCCAATAAGACTTTAAAAGAATTGAAAT
ATGGGTGCCGGGAATCAATGAAAACTTAAAAATCCA
407607
407608
GTTCCAATAAGACTTTAAAAGAATTGAAAT
TTAGAATAGTGTACACTTTTTAACTAAAAAATGAACG
407674
407675
GTTCCAATAAGACTTTAAAAGAATTGAAAT
AGCGACTTCTCAATGGACACGCCCGTCGCGAGGTTCGT
407742
407743
GTTCCAATAAGACTTTAAAAGAATTGAAAT
CACTACTTCGGTCACTTGATCAGAGAGCCATTCTGCAA
407810
407811
GTTCCAATAAGACTTTAAAAGAATTGAAAT
GTGTTTTTGCGATGTATTCAATCTTCATGCGAGTAAATGAGGAAAA
407886
407887
GTTCCAATAAGACTTTAAAAGAATTGAAAT
ACTATCCCGCTTTGTGAGGTTTTAGACGCTACGAACTGTTCCA
407959
407960
GTTCCAATAAGACTTTAAAAGAATTGAAAT
TCATGAAACTCATCACCATAATGAAACTTAGTTTCATT
408027
408028
GTTCCAATAAGACTTTAAAAGAATTGAAAT
TTCACTTTAACCACCACTTGATGCCTAACCTCTTTAC
408094
408095
GTTCCAATAAGACTTTAAAAGAATTGAAAT
CCCATTACCCCTCCTTTGAATGTCACGCTCTCGAAGGGTTTTG
408167
408168
GTTCCAATAAGACTTTAAAAGAATTGAAAT
AATTTCATTAAGGTTCTCATCGTATTTTTTGATAATAA
408235
408236
GTTCCAATAAGACTTTAAAAGAATTGAAAT
AAGTCCTTTTGCTAATGCGATAGCTTCGTTTACCTTCTC
408304
408305
GTTCCAATAAGACTTTAAAAGAATTGAAAT
TTTTTTTGTTAATTCCCTGAAGATAATTGGGATATTACCACCC
408377
408378
GTTCCAATAAGACTTTAAAAGAATTGAAAT
AACCTCAATTGCTTGTTTTATTCCTTTCCTAAATTGC
408444
408445
GTTCCAATAAGACTTTAAAAGAATTGAAAT
TAGAACTTATGAAAGCTATGTAATTGAAGAGCAGAAAGA
408513
408514
GTTCCAATAAGACTTTAAAAGAATTGAAAT
CAGTAAACTTAACCACGTGTTGAATGTTCTTTTTAAT
408580
408581
GTTCCAATAAGACTTTAAAAGAATTGAAAT
AGCCCTTTCCCCTAACATCCGCTACCTTTTTGCCCAAAT
408649
408650
GTTCCAATAAGACTTTAAAAGAATTGAAAG
TTTCGATGCCCTTAACGTAACTCCCCTCTATTACGGG
408716
408717
GTTCCAATAAGACTTTAAAAGAATTGAAAG
AGTGGAACTTTCGGGGGTTCCTGGACTGCTGTAATAAT
408784
408785
GTTCCAATAAAACTTCAAAAAGCTCTTTTG
408814
Left flanking sequence : Till position 406450 (length
bp)
GAGCCTTCTTATGGCTGTTTTATTGACCCTTTGTGGAAAGGCTTATAAATTTCAAGCTCTCTAATAGTTT
TGTAGGGGATTTAAAGGAAAATTCGCCCCT
Right flanking sequence : From position 408814 (length
bp)
TTCCAATCTTCTGCCATGCAGTTGAACGTTTGTCACATGAATTGGGAAAAATTTCTTGGCAATACTCAAT
ATAGACGAAAAATATTCCGTAAAATTTATA
Print the CRISPR sequence : From position
bp To position
bp