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CRISPRs details
NC_022084_4
Flanking alignement tool
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NC_022084_4                                                                                                                 
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Strain :
Thermococcus litoralis DSM 5473
RefSeq :
NC_022084 (chromosome circular)
CRISPR id :
NC_022084_4
DR consensus (30 bp) :
CTTTCAATTCTTTTAAAGTCTTATTGGAAC
Number of repetitions :
10
Begin Position :
860433
End Position :
861075
860433
CTTTCAATTCTTTTAAAGTCTTATTGGAAC
TGGAAGGTTTCCAGGTATCCTTATACCGTGATCCTCC
860499
860500
CTTTCAATTCTTTTAAAGTCTTATTGGAAC
TAGACGATGTTAAGAAGTTTGCTTTTGAAGTTCAAGA
860566
860567
CTTTCAATTCTTTTAAAGTCTTATTGGAAC
CCGGCGACTGTCCAAGAGGTAAATGGTCGTTTTGCGGTTCTTAAG
860641
860642
CTTTCAATTCTTTTAAAGTCTTATTGGAAC
TTACTCCACCGATAACCGCACCGGCTATTGTTCCAACTCC
860711
860712
CTTTCAATTCTTTTAAAGTCTTATTGGAAC
ATCCTGACGCCTTAAGAACATAATGCCAGTCTGTGCT
860778
860779
CTTTCAATTCTTTTAAAGTCTTATTGGAAC
GTTCTAATAGGCGTTGGAGTACTCTACATGTTGCTGAG
860846
860847
CTTTCAATTCTTTTAAAGTCTTATTGGAAC
GCCCAGAACAACTCGCTGACCAAGTCGCCGGAACACT
860913
860914
CTTTCAATTCTTTTAAAGTCTTATTGGAAC
CAGCTAAGGAAGGTGACTATTCTACAGCCATAGTCGG
860980
860981
CTTTCAATTCTTTTAAAGTCTTATTGGAAC
CGGGAGCCTCGCTTACTCTCTTCAAGAACTCCCT
861044
861045
CTTTCAATTCTTTTAAAGTCTTATTGGAAC
861074
Left flanking sequence : Till position 860433 (length
bp)
ATGAGCACTGGAAGGAGAATTGCCAGAGAGATAAGGCAGGCAATTGAAGAAGATAGACTTGACGAGATCT
TAACTTAGCTTTGCTACTCCAACTAAGGCT
Right flanking sequence : From position 861075 (length
bp)
ATGGGCGTGTTTATAGTAACCTTTATTAGGGTTTTTGCTGAATTCTTTCAGGTGGTTGTCGTGATCCCCA
GATGGGATCACAGACTCAAAGACCCTGAAA
Print the CRISPR sequence : From position
bp To position
bp