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CRISPRs details
NZ_CP006942_1
Flanking alignement tool
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NZ_CP006942_1                                                                                                                 
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Strain :
Mannheimia sp. USDA-ARS-USMARC-1261 GCF_000521605
RefSeq :
NZ_CP006942 (chromosome circular)
CRISPR id :
NZ_CP006942_1
DR consensus (36 bp) :
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAAC
Number of repetitions :
8
Begin Position :
1932874
End Position :
1933371
1932874
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAAC
TCAAAACTATCTAATATAACTTGCCAATCT
1932939
1932940
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAAC
GTCGCACAACAACGAGCGTTATTGAGAAAA
1933005
1933006
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAAC
TTCATCGCCTTGTATGCCAACCTTGATTTC
1933071
1933072
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAAC
GTTGCCGTTGTTATAATCATCACGCACAAA
1933137
1933138
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAAC
TGTGGCAAGCGAATTATCTAGAGGTTGTGA
1933203
1933204
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAAC
TTCAACGAATAAATGGGCTGATGTTTGTCG
1933269
1933270
ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAAC
AAGAGCTAAATCGCAAAATCTTTACCGAAG
1933335
1933336
ATTGTAGCACTGCGAAATGAGAAACACTCACCTCAA
1933371
Left flanking sequence : Till position 1932874 (length
bp)
AAATTTCAGAAAAATAACCGCTTACAAAAGGGCTCTAGCTCAATTTTTTATCGAACTGCCCCTCGCAAAA
CCCTTGATAAATAAGACCCTAAGCGAGAGG
Right flanking sequence : From position 1933371 (length
bp)
ACCCAAATTAGATAAAATAAATATTCGCAATTTTCTTTCGCAAGCGGTAGAATTTTATCCAACTTTTACC
AATTAAGGAGTAGATTATGGAACATTTTAT
Print the CRISPR sequence : From position
bp To position
bp