Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP007258_2                                                                                                                 top


Strain : Salmonella enterica subsp. enterica serovar Enteritidis str. EC20110360 GCF_000623295 RefSeq :NZ_CP007258 (chromosome circular)
CRISPR id : NZ_CP007258_2
DR consensus (29 bp) : CGGTTTATCCCCGCTGGCGCGGGGAACACNumber of repetitions :13
Begin Position : 2966217 End Position : 2966978

2966217ACGGCTATCCTTGTTGGCGCGGGGAACACGGCTACACGCAAAAATTCCAGTCGTTGGCGCA2966277
2966278CGGTTTATCCCCGCTGGCGCGGGGAACACCCGATTAAGATCCGCAGTCTGCATCAGTAACT2966338
2966339CGGTTTATCCCCGCTGGCGAGGGGAACACCGATTCTACGGCAACAGGCCAGGCTGCGACCG2966399
2966400CGGTTTATCCCCGCTGGCGCGGGGAACACATCAAACATGGAAACCCCTTTAATGAGAGCAA2966460
2966461CGGTTTATCCCCGCTGGCGCGGGGAACACTCAGGAACGCGCGGCGGAAGAGCTTGGTGTTTG2966522
2966523CGGTTTATCCCCGCTGGCGCGGGGAACACGCTGCCTTTCCCGGAGTTCCGGCCCCTAAATT2966583
2966584GGGTTTATCCCCGCTGGCGCGGGGAACACTCATGCGCTATAAAAATCAGACTGTCACATGC2966644
2966645CGGTTTATCCCCGCTGGCGCGGGGAACACTGATTATTGACGACAACAGCACAGACCGGCAG2966705
2966706CAGTTTATCCCCGCTGGCGCGGGGAACACAATAATCGGCAATTTGTCCTGGACAGGCACGG2966766
2966767CAGTTTATCCCCGCTGGCGCGGGGAACACAATAATCGGCAATTTGTCCTGGACAGGCACGG2966827
2966828CAGTTTATCCCCGCTGGCGCGGGGAACACAATAATCGGCAATTTGTCCTGGACAGGCACGG2966888
2966889CAGTTTATCCCCGCTGGCGCGGGGAACACGAATCTGGAGGCCAACAGCGCGGCGAAATCCT2966949
2966950CAGTTTATCCCCGCTGGCGCGGGGAACAC2966978
Left flanking sequence : Till position 2966217 (length bp)
ATGGCCTTCTCCTGTAGAAAAGCCTCCCCCGGGAAAACGCGGCCTTTTTACTTTACAGGTTTGTACCAGC
CATTACTGGTACACAGATTATGATTATGCA
Right flanking sequence : From position 2966978 (length bp)
ACTAAACGTATGTCATTGTTTATAAACTACTTTTTATCAGCACCACATTCCACCAACATAATCGCAACAA
TTTAAATTATTAAAGAACAGCTAATTTGCT
Print the CRISPR sequence : From position bp To position bp