Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP007592_2                                                                                                                 top


Strain : Escherichia coli O157:H16 GCF_000827105 RefSeq :NZ_CP007592 (chromosome circular)
CRISPR id : NZ_CP007592_2
DR consensus (28 bp) : GTTCACTGCCGTACAGGCAGCTTAGAAANumber of repetitions :3
Begin Position : 1272544 End Position : 1272692

1272544GTTCACTGCCGTACAGGCAGCTTAGAAAAACCTACCGTCTTGGCTAGCGGTTGCAGCGAAC1272604
1272605GTTCACTGCCGTACAGGCAGCTTAGAAATTCACTGGTAACATACTCCACCCGCCCACCAT1272664
1272665GTTCACTGCCGTACAGGCAGATAAAATG1272692
Left flanking sequence : Till position 1272544 (length bp)
TGATAATTAGTGCTGCTGGAAGGTAAGGATAAAAAAGGGTGCTGCAGGAGAATGGGATGGTTTTGCTTTA
TTAACAACGGGCTAAACGTGTAGTATTTGA
Right flanking sequence : From position 1272692 (length bp)
CGAAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCC
CCGATACGTTGCCGTATACACACTTTCCAG
Print the CRISPR sequence : From position bp To position bp