Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP009045_4                                                                                                                 top


Strain : Bifidobacterium animalis subsp. lactis GCF_000818055 RefSeq :NZ_CP009045 (chromosome circular)
CRISPR id : NZ_CP009045_4
DR consensus (36 bp) : CCCTCAATGAAGCTCCGAAGCCGAGACTTCGGAGATNumber of repetitions :20
Begin Position : 1511464 End Position : 1512868

1511464TCCTCAATGAAGCTCCGAAGCCAAAACTTCGGAGATGCCTCCTGATGGATCTCCACGACGTTGCTGGCCCT1511534
1511535TCCTCAATGAAGCTCCGAAGCCGAGACTTCGGAGATGCCATCCCGACTGTGGCGGCGGCGTTCGGTGTCGC1511605
1511606CCCTCAATGAAGCTCCGAAGCCGAGACTTCGGAGATGACAGTGCGAACACAGTGCAGTCGGTGACGATCGCG1511677
1511678CCCTCAATGAAGCTCCGAAGCCGAGACTTCGGAGATTCGGTCTTCTTGAGCTGGTCGGTGAGTGTCTTGAGC1511749
1511750CCCTCAATGAAGCTCCGAAGCCGAGACTTCGGAGATGCAACGCCTTCGTTCGCCTCGTGGACTATCGCGGCC1511821
1511822CCCTCAATGAAGCTCCGAAGCCGAGACTTCGGAGATCAGGTTCTCGAGGATGCTCACTATTTCCGTGAGGATGAT1511896
1511897CCCTCAATGAAGCTCCGAAGCCGAGACTTCGGAGATCTATACCCGTATGCAATGCTGTGCGCGTTGGATGCAAG1511970
1511971CCCTCAATGAAGCTCCGAAGCCGAGACTTCGGAGATTGGCGCGAGCAGTATCACCACGTGGCTGCTCAACCG1512042
1512043CCCTCAATGAAGCTCCGAAGCCGAGACTTCGGAGATAACGGTTCGATGGTTCGCACAGTGAGTTGTTCACTC1512114
1512115CCCTCAATGAAGCTCCGAAGCCGAGACTTCGGAGATTTCGTCTCCTCCCTGCGCCGCTGATTGACCTGTTT1512185
1512186CCCTCAATGAAGCTCCGAAGCCGAGACTTCGGAGATATTTCAGGCGGCATCAGACCTTGCGGCTGGGATT1512255
1512256CCCTCAATGAAGCTCCGAAGCCGAGACTTCGGAGATGCGTGTGGTGGAAAAACCAGCCCGTCACCGAAGCGGCC1512329
1512330CCCTCAATGAAGCTCCGAAGCCGAGACTTCGGAGATTCGCAGGTGAATATCGGTGGCGGCGGCTTGTCGT1512399
1512400CCCTCAATGAAGCTCCGAAGCCGAGACTTCGGAGATCGGATAGTATCCTGCGTCGCGTCTCCAATGGCGA1512469
1512470CCCTCAATGAAGCTCCGAAGCCGAGACTTCGGAGATCTGACAGCATCCTCTCATTCCTCTCGAACGGCGAATAC1512543
1512544CCCTCAATGAAGCTCCGAAGCCGAGACTTCGGAGATTGTTCGCTTTGATGCGTGTGATTGAGTTCGGCTT1512613
1512614CCCTCAATGAAGCTCCGAAGCCGAGACTTCGGAGATTTCGGCGCGTGTTCCTCCGCCGTTGCCGTTGTGGTGGGC1512688
1512689CCCTCAATGAAGCTCCGAAGCCGAGACTTCGGAGATGAGGTCATGGTGAAGTCGCGTTCGGTGCCGGTCTT1512759
1512760CCCTCAATGAAGCTCCGAAGCCGAGACTTCGGAGATCCGCCTCCCACTCCGCCACGCTGAGCGCCATATCGTC1512832
1512833CCCTCAATGAAGCTCCGAAGCCGAGACTTCGGAGAT1512868
Left flanking sequence : Till position 1511464 (length bp)
TATGAGACTAATCGGTAATGTATCTTCCAACCCTTCACCTCGCTTCATTGCGTTATTCTCAGCATACTTC
ATTTTTGCTTAGATAAAAATCGGAGTACAT
Right flanking sequence : From position 1512868 (length bp)
AGTAGCCATAATACAGACTGATACACATAGTCTGATAAGCGCTTTTGCGAGAGGTAGACAAATTGACGTG
ATACAAACGACTGATTTATCTACACAAACT
Print the CRISPR sequence : From position bp To position bp