Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP009194_4                                                                                                                 top


Strain : Mycobacterium tuberculosis TRS28 GCF_001998485 RefSeq :NZ_CP009194 (chromosome circular)
CRISPR id : NZ_CP009194_4
DR consensus (36 bp) : GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACNumber of repetitions :4
Begin Position : 3120213 End Position : 3120468

3120213GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCATTAGTTGGTGTTGTGATCGCTAANNNNNNNNNNN3120284
3120285NTTTCCGTCCCCTCTCGGGGTTTTGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGG3120358
3120359GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGNNNNNNNGAGCTGAGGCGCCGGATGATGGTGGTGCTGAAG3120432
3120433GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC3120468
Left flanking sequence : Till position 3120213 (length bp)
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACGCGTTG
TGGTCGTGTCGTGGAGCCTGTATTTCGCTG
Right flanking sequence : From position 3120468 (length bp)
TGACAGGGTGCGGTGGTCGCTGATCGGCTCCCCGAGTTTCCGTCCCCTCTCGGGGTGAACCGCCCCGGTG
AGTCCGGAGACTCTCTGATCTGAGACCTCA
Print the CRISPR sequence : From position bp To position bp