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CRISPRs details
NZ_CP009528_5
Flanking alignement tool
Page manual
  
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NZ_CP009528_5                                                                                                                 
top
Strain :
Methanosarcina barkeri MS GCF_000970025
RefSeq :
NZ_CP009528 (chromosome circular)
CRISPR id :
NZ_CP009528_5
DR consensus (37 bp) :
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
Number of repetitions :
103
Begin Position :
247989
End Position :
255527
247989
CAATCTTTCTCTTTTTTATTGGATCTTGCTCGCGAAT
AGTATATACACAACTTACTTAAAAAGCATTGCTCACGAATCGAGTTTTCTGAGAATGTATGCCCAAAAGCTGTAT
248100
248101
GTTTCAATCCTTGTTTTAATGGATCTTGCTCACGAAT
ACGTGACCTATCATGAGCTTTCCAAGAGGACGCCCTGT
248175
248176
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATATCTAGACGGTGACAATGTAGTCCATATAGTTCC
248248
248249
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CCCTCAAGTCATGGGAGTTCTTTCTTGACGAGAA
248319
248320
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATTTTTGAATGTCTCCAACCGTCCCCGGTTCTCTGT
248392
248393
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
AAGAGGTAAAAGAGTCAAACTTCTTGAACGTATTGA
248465
248466
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ACCTCTTTAAATTCATTCAAATTGTATCCACAATTTT
248539
248540
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TCGGAGAAGCTGCTGGTCCAGCATTATCAATTATTTC
248613
248614
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATATCTGTGTATTACAATAGGCTGCAAATACTACACT
248687
248688
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATTGGAAAGTGTGTTGAATGTGAAAAGGTGGGAA
248758
248759
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
GAAATTCCTATCCCCCAGAACGCTTACTACAGCAAT
248831
248832
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATTTTTGGACAAGGTGAATATATGAAGGCAACCTT
248903
248904
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CTCTTTTTTCTCTCCGACCCATTTCTCGGTTGTTAAAAA
248979
248980
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CAGATAGAAAGCATGGAATCAGAGACAAGGAAGTT
249051
249052
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TCAAGCTTTTTTGTTTCATCTGTCAGGAGTTTGTTA
249124
249125
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
AAATGAACTGACATATTGGGGATGTATAGACCTAAACCA
249200
249201
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
AATAAGATGAAATAGGAGATATGAGAAAATGAG
249270
249271
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TCATTGTTTTAATCTCCTTTCAATCATCCAATTAT
249342
249343
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATGAACCAGAACAACGGATGGAATATACATTATCTT
249415
249416
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
AATTGATAATGAAGTCGAAAACATGGTTGACCTTCC
249488
249489
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
GTATGGAAAATGTCACAAATATGTAAAAAAACACCAAT
249563
249564
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATATGTTAATAAGCGACTTAACAACAGAGGAGATGAT
249637
249638
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TTCTATAAGCGTTCACTTCTTGGAGAAGACGGGTATA
249711
249712
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATGTCATTTGAAAGTTCCTTTCTTATTTTATTTTATA
249785
249786
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TTTTGGATCATTTTGGGATGCAGATCAGTGGTTTTC
249858
249859
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CCCTGAGATAGTCACACCTTTGATATCTAGACTAG
249930
249931
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TTCGTCGGGGTCAAATCTTATACATCCCTGTAGTC
250002
250003
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
AGGTCATACATGATATTGCATAATCTCTCTTTT
250072
250073
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TTTTTGTTTCTGTTCTGGTTCTAATAGCATTTTTA
250144
250145
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATGTCCTCTTTGCGTTGCTTACTCCAGGGCAGCATG
250217
250218
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
GTAATAGTAAGAAATCATATATTTATTGTTTATG
250288
250289
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATCAATAGAAGCCGAAACCGAAAAAGCTTACCTAAT
250361
250362
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TTGTTTCTTGAGGACGGTGAGAGCATGAGTATTC
250432
250433
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TTCGTCGGGGTCAAATCTTATACATCCCTGTAGTC
250504
250505
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
AAGGCAAAAAATACGTAATCACACTCACAAAAGA
250575
250576
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
GCTCCTGCAGCTCTCCGGGAATTCTCCAGGGTCC
250646
250647
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATCACCATTTCAACCTAAGTTTTCCTGTTGAAT
250716
250717
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATTACTCCCTCTTCCGTTCATCTCGAATAATGA
250786
250787
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATTTGTTCATCATTTTTAGAACCGTCATCTATTA
250857
250858
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
AATCACTGCTCGAACACAGATTGCCATGAAATGGTGTAA
250933
250934
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CGAATAATGAAACTAATCCCTGGGAAGAATCAGACT
251006
251007
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ACTCTGAAATTTCATTGTCATCACCAGACACTTCCCCGAAG
251084
251085
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATGAAAACAAGGTCTCTAGAACGAGCCATGATTCTTTGA
251160
251161
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CATAACATCACCAGATTGTTTCTATCCCATTCACAA
251233
251234
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
AATACAGAGGATTTTTTTGAGCAACTTAAACAATATGA
251308
251309
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
GAAAGTACAGGACTTCAGAAATTAGGATTGTAATATT
251382
251383
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TTGGGCGAACCAAAGTGATTTATTATCCCGCAAAGAAC
251457
251458
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CTCTGGAAAGCAAATAAAAGTTGAATCCGAGTCTG
251529
251530
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATAGGTAGTTGATATGTCAAATAACAAATAGTCAT
251601
251602
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CTAAATAATACTGCTACCGTAGAGCTCAGAAGCTCC
251674
251675
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ACTCAGGCATTTTATTGATGTCTGCTTGCTGTTCTGATGT
251751
251752
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TCCGGTTAGGTTGATGAGGACGAATGCGAGCTGAA
251823
251824
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
AGAGAGTATTGATTATTCAAAATCGCAAGTCCGGCGTATGGTGG
251904
251905
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TTTTGTCAGGATAGAAAAGTGCCTTTCATATCTAA
251976
251977
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ACGAATCTGATCAGATAGAGGCTACAGATCTGTTTAA
252050
252051
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TCCAAGAATTACCCGGCTCTTCAGTCGTTGGACTGT
252123
252124
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ACCGCTCTTTATAATTTAGCTAAGGACGAAGCAAT
252195
252196
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
GCGCGTGATAGTTCATTTATTCTTCCTCACAAATTGC
252269
252270
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TTATTTGCAGTAGGTCAAAAGTGACCTTAGTTGAT
252341
252342
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TTAAAACAGTGTACCAATTTAGACAGGAACTGGA
252412
252413
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
AAGCTCTTATAGGTCCGGTGGGGTGTGTTGCAGAA
252484
252485
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CTTTCAGGAAAACCGGCTTCTGGATAGCAGAAGATTA
252558
252559
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
AACGCAAAAAAACTATGAGAAACATATAGGCAGATA
252631
252632
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TGTCATTAGATCATTTACCCTCGGTGCCGGTAGTGTT
252705
252706
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CTTTCAGGAAAACCGGCTTCTGGATAGCAGAAGATTA
252779
252780
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
AACGCAAAAAAACTATGAGAAACATATAGGCAGATA
252852
252853
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TGTCATTAGATCATTTACCCTCGGTGCCGGTAGTGTT
252926
252927
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
GATAAGAAGGAAGGCCTTTTCAGGAATCGCATATAT
252999
253000
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
AATAAAGGAGGGCGTTTTGAATGAATGATGATGTTGAGG
253075
253076
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CCGAAAGCGTTACCGGGTTCCTCACCAATATGTATTA
253149
253150
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CCAAAAAATTAAGAAAGATCAAACATCCTGAGCTC
253221
253222
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
GCTCGAGACAGTAGAGCTGTTCAAGCTGCAAGAAGTCT
253296
253297
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ACAGTCAATTGGATTGTATATCCTTTCTCCGTTCTTG
253370
253371
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
GCAAAGGGTTTGAGCGGGATATCAAAGTGGAAGG
253441
253442
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TGTGTTTATAATGTGTTTTGTATCAAAGAGGGGAAT
253514
253515
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
GAAACTAAAAAATTGAAAGGCAGACCGTCAAAAAC
253586
253587
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
GACGCGAACGACCGTATGGAAACAGCGTGTATTCATT
253660
253661
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TCTGAATTAGTCCAGGTATGATCAAAAGTTTCGAGTG
253734
253735
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TCTGAATTAGTCCAGGTATGATCAAAAGTTTCGAGTG
253808
253809
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TTCCCCATTGGGTGTATAATAGCCCCTGAATCCAAGA
253882
253883
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CCGCTGGCATTAGCTGAGCTATCAGAGTCAATGAT
253954
253955
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATAAAAGAGCACAATATCTCATTAGTAGTTGTTT
254025
254026
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATGAGTGCATATTCACAACATTATCCAACTTTAAAAA
254099
254100
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
AGATGGAAAGTATGAATTCTTTGTCCACTGCTATTCTAA
254175
254176
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TGGGAGCCACTAACAATTCCCGAAGAGTGGTTATCTG
254249
254250
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
GTTGATATGTCAAATGACGAATACGAAACGATCACAA
254323
254324
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TTCTTGCAGTTCCTTCATTCAAAGGGGTTGTTTCATCGTTG
254401
254402
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TGTTCAGAGGTTATTTTCCCTCCGAACCCTGTAG
254472
254473
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
GATACTGGATTTTGTAAAGGTGGAAAAGAGTGGA
254543
254544
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATTTTTGAATGTCTCCAACCGTCCCCGGTTCTCTGT
254616
254617
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
AAGAGGTAAAAGAGTCAAACTTCTTGAACGTATTGA
254689
254690
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ACCTCTTTAAATTCATTCAAATTGTATCCACAATTTT
254763
254764
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TCGGAGAAGCTGCTGGTCCAGCATTATCAATTATTTC
254837
254838
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATATCTGTGTATTACAATAGGCTGCAAATACTACACT
254911
254912
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ACCCTATCTTCAAAAGTATCAATTTTAAAAGCAGAAA
254985
254986
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATATCGTCAGAGTCTCCTAGAATCATATCAGAAA
255056
255057
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TTTTGGATTTTGTAGCACCCGATACTATTTTTT
255126
255127
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
GTTAAATTGGGGTTGAATATTGCACCATCGATTTT
255198
255199
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CTGTAACAGTTGGCACAAATCCTCGCGGGGTTGCTG
255271
255272
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CGGCTTATTAGACCTAGAAATCATATTTGAATAGGTGT
255346
255347
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TCGTTTTCCAGTGGAAACTAAGCTATTTATATAC
255417
255418
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TTGAGTATGTTCCTGAAGAAGAACAGTATCCACTAT
255490
255491
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
255527
Left flanking sequence : Till position 247989 (length
bp)
TACTTATTTGGGTTTTATTATTATTTTTACTACCAAATAAATTTTTAAGGAAATCTAGCATTTTCATCGC
CTGATATACTTCGCAAAAATATAAAAGTTT
Right flanking sequence : From position 255527 (length
bp)
AGGGCAAAAATTTCCGTTATTTGGCTAGAAAAGGCCTGAAATGAGTCCTTTTTTGGGGTTGAAATTCTTG
CTGGAAAATTATCAAACCCTTTATAAATAC
Print the CRISPR sequence : From position
bp To position
bp