Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP009561_1                                                                                                                 top


Strain : Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 GCF_000272815 RefSeq :NZ_CP009561 (chromosome circular)
CRISPR id : NZ_CP009561_1
DR consensus (29 bp) : CGGTTTATCCCCGCTGGCGCGGGGAACACNumber of repetitions :18
Begin Position : 170136 End Position : 171201

170136GTGTTTATCCCCGCTGGCGCGGGGAACACGATGAGCAACACGCCCGCACTGGCGTAACTTA170196
170197CGGTTTATCCCCGCTGGCGCGGGGAACACCGTTGGCTGGAGATATGGGAGTACCTTTGGAA170257
170258CGGTTTATCCCCGCTGGCGCGGGGAACACATATCCAGCCTGCGATAGAGATAGTTTTCCGG170318
170319CGGTTTATCCCCGCTGGCGCGGGGAACACGAGGTGGCAAAATATTGTCAGCGGGATTTTTT170379
170380CGGTTTATCCCCGCTGGCGCGGGGAACACTTTACCAATCTGTAAATATTTTTCATCTGCTG170440
170441CGGTTTATCCCCGCTGGCGCGGGGAACACAGTTCGCTCTCGATCGTCGCGGCATACATCGC170501
170502CGGTTTATCCCCGCTGGCGCGGGGAACACGATTGCACAGGGGGTGAGTATGGAACAGCTGA170562
170563CGGTTTATCCCCGCTGGCGCGGGGAACACGAAATTTCCACCGTGGATATTTCGGTTATTGG170623
170624TGGTTTATCCCCGCTGGCGCGGGGAACACAATACTGACGTGTTTCACGCTGCTGCCGTCTG170684
170685CGGTTTATCCCCGCTGGCGCGGGGAACACCCAACAGTAATTGCAAAATCCTGTTGTTTAAT170745
170746CGGTTTATCCCCGCTGGCGCGGGGAACACTTTTTTCTTCGGTGCCCAACCGCAGCCTAACG170806
170807CGGTTTATCCCCGCTGGCGCGGGGAACACTTATAGAGTTGACTCAAATTCATTTTTATTCC170867
170868CGGTTTATCCCCGCTGGCGCGGGGAACACTAGCCGGGTCTGTATCGAATACCAGCCCCGCG170928
170929CGGTTTATCCCCGCTGGCGCGGGGAACACTAAAATTGGCATCATAGATGGTTTGATAGTCC170989
170990CGATTTATCCCCGCTGGCGCGGGGAACACATGCAATGGGGAATAAGTGGCGGGTAAATCAA171050
171051CGGTTTATCCCCGCTGGCGCGGGGAACACCCGTCGCCGCACGCAAACAATCCGGGCGCCCA171111
171112CGGTTTATCCCCGCTGGCGCGGGGAACACTCAATAACCCCTTTTAAATACTGCCGTTCCAG171172
171173CGGTTTATCCCCGCTGGCGCGGGGAACAC171201
Left flanking sequence : Till position 170136 (length bp)
GGCGAATTGAGCGCCGTAGCCGCGATGTAGTGCGGATAATGCTGCCGTTGGTAAAAGAGCTGGCGAAGGC
GGAAAAAACGTCCTGATATGCTGGTGAAAC
Right flanking sequence : From position 171201 (length bp)
CCTAAATCTACCCAATTGAATTTAAATACTTTTTTAGCGCACAAAAAACCCACCAACTTTTCCTAATTTT
TAAAGATCTATAACTTATTGATTTTCAACA
Print the CRISPR sequence : From position bp To position bp