Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP010221_1                                                                                                                 top


Strain : Escherichia coli GCF_001901215 RefSeq :NZ_CP010221 (chromosome circular)
CRISPR id : NZ_CP010221_1
DR consensus (29 bp) : GTGTTCCCCGCGCCAGCGGGGATAAACCGNumber of repetitions :13
Begin Position : 360133 End Position : 360893

360133GTGTTCCCCGCGCCAGCGGGGATAAACCGCCTCCCCGCTCACGCCAACGTTAAACGTTATC360193
360194GTGTTCCCCGCGCCAGCGGGGATAAACCGACTCAGTCAGCGCGTTAACCCCTTCACACGAC360254
360255GTGTTCCCCGCGCCAGCGGGGATAAACCGGAACGGCGGCTATACGGATTCGACAGGTCAGC360315
360316GTGTTCCCCGCGCCAGCGGGGATAAACCGTAACCCGGATAACTGGCAGAGTGCGAATAAAC360376
360377GTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGAGATCATCATATTCTGATACGTTCCGGT360437
360438GTGTTCCCCGCGCCAGCGGGGATAAACCGATTCTTGATCACGCTTTTACCGAAGTAATGGT360498
360499GTGTTCCCCGCGCCAGCGGGGATAAACCGGCTCCCTGTCAGTTGTAATCGATAACGTTGAT360559
360560GTGTTCCCCGCGCCAGCGGGGATAAACCGATGTAGGGGCAATCGAACGATTCTCTGCCGAC360620
360621GTGTTCCCCGCGCCAGCGGGGATAAACCGCCGAGCCCGATTATCGGCATGAGCGATGCGGA360681
360682GTGTTCCCCGCGCCAGCGGGGATAAACCGTCGAAGAAGAAAGGGAAATAATGCGAGGAACG360742
360743GTGTTCCCCGCGCCAGCGGGGATAAACCGTATTACGCGCCAGCAATGCTGACAGCGGCAAA360803
360804GTGTTCCCCGCGCCAGCGGGGATAAACCGCGCGAGAGCCAGCAAAACGCCAGGGCACAAAA360864
360865GAGTTCCCCGCGCCAGCGGGGATAAACCA360893
Left flanking sequence : Till position 360133 (length bp)
ACTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAA
ATCATTAATTAATAATAGGTTATGTTTAGA
Right flanking sequence : From position 360893 (length bp)
CCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGT
AACCCCTCATGTTCAAAATAGTTCTCCATG
Print the CRISPR sequence : From position bp To position bp