Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP010226_6                                                                                                                 top


Strain : Escherichia coli GCF_001901315 RefSeq :NZ_CP010226 (chromosome circular)
CRISPR id : NZ_CP010226_6
DR consensus (28 bp) : TTTCTAAGCTGCCTGTACGGCAGTGAACNumber of repetitions :4
Begin Position : 2552764 End Position : 2552968

2552764CATTTTATCTGTCTGTACGGCAGTGAACATGGTGGGTGGAGTATGTTACCTGTGAA2552819
2552820TTTCTAAGCTGCCTGTACGGCAGTGAACGCCAACTTTCACAGCCTTTGCAAGATTGTTCC2552879
2552880TTTCTAAGCTGCCTGTACGGCAGTGAACGTTCGCTGCAACCGCTAGCCAAGACGGTAGGTT2552940
2552941TTTCTAAGCTGCCTGTACGGCAGTGAAC2552968
Left flanking sequence : Till position 2552764 (length bp)
CCTGGAAAGTGTGTATACGGCAACGTATCGGGGGTTCGAATCCCCCCCTCACCGCCATATTTAAAGAAGA
GCTCGTACGAAAGTGCGAGCTTTTTTTTCG
Right flanking sequence : From position 2552968 (length bp)
TCAAATACTACACGTTTAGCCCGTTGTTAATAAAGCAAAACCATCCCATTCTCCTGCAGCACCCTTTTTT
ATCCTTACCTTCCAGCAGCACTAATTATCA
Print the CRISPR sequence : From position bp To position bp