Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP010888_13                                                                                                                 top


Strain : Clostridioides difficile GCF_001577795 RefSeq :NZ_CP010888 (chromosome circular)
CRISPR id : NZ_CP010888_13
DR consensus (29 bp) : ATTTACATTCCATATAGTTAATATAAAACNumber of repetitions :6
Begin Position : 3319613 End Position : 3319970

3319613ATTTACATTCCATATAGTTAATATAAAACTCAATTAAATTATGACCTTGGTTTAGATAGTTCATT3319677
3319678ATTTACATTCCATATAGTTAATATAAAACCAGAAGGAATATCTGGAGTTATTGGAGGGTCTATTGG3319743
3319744ATTTACATTCCATATAGTTAATATAAAACATTTACTAAGTGTAGATATAATTATAAATACGATTTA3319809
3319810ATTTACATTCCATATAGTTAATATAAAACCTGTAGACTTCAACCCTACAATGCTTGTTGGAAGTGT3319875
3319876ATTTACATTCCATATAGTTAATATAAAACTTTTGTAAAAGTTTAGAAGTTTATATATAAAAAAAAT3319941
3319942ATTTACATTCCATATAGTTAATATAAAAC3319970
Left flanking sequence : Till position 3319613 (length bp)
GATAATAATTTATATGTTTAGAGATAAAATGGATAAATGTACACATATATTGACTGCTTATATTAGCAAT
TCGTATGATTATTGTAATTTTTTGGATACA
Right flanking sequence : From position 3319970 (length bp)
CCCAAAATAAATTGAGTATTTCCAATGCCTACACATATACAAATCTCTCAAATTTGCAGTGAACCATGAG
TAGTGCAATTGATAACACTTATCACAAGTC
Print the CRISPR sequence : From position bp To position bp