Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP010905_7                                                                                                                 top


Strain : Clostridioides difficile 630 GCF_000932055 RefSeq :NZ_CP010905 (chromosome circular)
CRISPR id : NZ_CP010905_7
DR consensus (29 bp) : GTTTTATATTAACTAAGTGGTATGTAAATNumber of repetitions :13
Begin Position : 1629842 End Position : 1630666

1629842GTTTTATATTAACTAAGTGGTATGTAAATTAAAACCACTCAATTCTTAAAAGATACTGCAATTATT1629907
1629908GTTTTATATTAACTAAGTGGTATGTAAATGGACATTTTAACCATAGACTATTTTACAAACAAACTT1629973
1629974GTTTTATATTAACTAAGTGGTATGTAAATGGAGATTTAAAAGTTAACAACATAAAAATGATAGATA1630039
1630040GTTTTATATTAACTAAGTGGTATGTAAATTGGTGAACAATAAAACAATCATCTAAAGACGAAGAAAA1630106
1630107GTTTTATATTAACTAAGTGGTATGTAAATATAATCCAGAAGATGATACACTTCTTGAACAATATATTG1630174
1630175GTTTTATATTAACTAAGTGGTATGTAAATCTATCAATATATATTTTATAAGCATAAGTTTTACGCAT1630241
1630242GTTTTATATTAACTAAGTGGTATGTAAATAACAACGTCATATATATCATCTTTAGTTGTAAGAGCA1630307
1630308GTTTTATATTAACTAAGTGGTATGTAAATAGTTATGTCAAATTATTAGAAACTAAAAACCTAGTTGG1630374
1630375GTTTTATATTAACTAAGTGGTATGTAAATAATATCTAAAAAAAACGACTTATATCCCATTTCTACA1630440
1630441GTTTTATATTAACTAAGTGGTATGTAAATAATTTAGAAAAGGACTATTAGGAAGCAAAGAAAAAAT1630506
1630507GTTTTATATTAACTAAGTGGTATGTAAATAAAGTAAATCCTAGAGCATAACCAATTTTCGTAGGC1630571
1630572GTTTTATATTAACTAAGTGGTATATAAATAGTATAATGTTGAAAAGTTAGAGAGTACAATCAAGAA1630637
1630638ATTTTACATTAACTAAAATGTATAGAATA1630666
Left flanking sequence : Till position 1629842 (length bp)
GGCATGTGATAAGCTTTATCATTTGCACTACTCATGGTTCGCTGCAAATTTAAGAGAGTTGCACATGTGT
AAGCATTGAAAATGCCCAGTTTATTTTGGG
Right flanking sequence : From position 1630666 (length bp)
AAACATGTATTTATACTTAAATTCTTTACCTATATAAAAAAGTGAACTCTGTCAACAAAGCACTTTTTTA
TATAGATAAATTATCATTTTGTTTTAAGAT
Print the CRISPR sequence : From position bp To position bp