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CRISPRs details
NZ_CP011104_3
Flanking alignement tool
Page manual
  
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NZ_CP011104_3                                                                                                                 
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Strain :
Photorhabdus temperata subsp. thracensis GCF_001010285
RefSeq :
NZ_CP011104 (chromosome circular)
CRISPR id :
NZ_CP011104_3
DR consensus (28 bp) :
TTTCTAAGCTGCCTGTACGGCAGTGCAC
Number of repetitions :
26
Begin Position :
5048451
End Position :
5049978
5048451
TTTTTAAACTGCCTGTACGGCAGTGCAC
AAACTTAGTCGCTTCGTCATAATGTTTCCTCT
5048510
5048511
TTTCTAAGCTGCCTGTACGGCAGTGCAC
GGATCAGTCTAACCAGTCAGCCCTGATTGGAC
5048570
5048571
TTTCTAAGCTGCCTGTACGGCAGTGCAC
TAGTTAAATATGGGAACAGCAACATTAATTTT
5048630
5048631
TTTCTAAGCTGCCTGTACGGCAGTGCAC
ATCCTCGGCAATCACGTTGCCGTTGTAGCAGA
5048690
5048691
TTTCTAAGCTGCCTGTACGGCAGTGCAC
ATTGATTTGACTGGGATGCTTGGTGATGAAGT
5048750
5048751
TTTCTAAGCTGCCTGTACGGCAGTGCAC
TCCTGCATTGTTCAGCGGCCTTTTTTATCCAC
5048810
5048811
TTTCTAAGCTGCCTGTACGGCAGTGCAC
TATTGCTGTAGTTGATCTGGAAGAAATGAACT
5048870
5048871
TTTCTAAGCTGCCTGTACGGCAGTGCAC
TCAAGTTAAGACCTTTACAGTTCCACACGTCA
5048930
5048931
TTTCTAAGCTGCCTGTACGGCAGTGCAC
TCAGTCATGAGGCTTGATGATGGGTATCAATT
5048990
5048991
TTTCTAAGCTGCCTGTACGGCAGTGCAC
TCTGCCAATGTGCCGAGTGGAATATCTGTAAA
5049050
5049051
TTTCTAAGCTGCCTGTACGGCAGTGCAC
AAATTAATTCCTTTCGCATAGCTCGCTTTCGT
5049110
5049111
TTTCTAAGCTGCCTGTACGGCAGTGCAC
ACGTAAAGATAGCCCATCACACGGAGGTGTTT
5049170
5049171
TTTCTAAGCTGCCTGTACGGCAGTGCAC
CATTGATATGCAAATCAATTATTTGTTATCGA
5049230
5049231
TTTCTAAGCTGCCTGTACGGCAGTGCAC
ATAACAAAAGTGGTCAATTCAATGCGCCGTTT
5049290
5049291
TTTCTAAGCTGCCTGTACGGCAGTGCAC
TAAGGCAAGTATGGACTCACGGGCCGCACAAA
5049350
5049351
TTTCTAAGCTGCCTGTACGGCAGTGCAC
TGGGTCAGCAATTTTATGAACCTGCGCAAGGT
5049410
5049411
TTTCTAAGCTGCCTGTACGGCAGTGCAC
GAATAAGAGAGTAAATAACGATGAATAATGGA
5049470
5049471
TTTCTAAGCTGCCTGTACGGCAGTGCAC
CGAAGGGGCACACTCTCAGATATATGGCAAAT
5049530
5049531
TTTCTAAGCTGCCTGTACGGCAGTGCAC
AAAAATTACAAAAGGCAGAGGGTGTTATTGAA
5049590
5049591
TTTCTAAGCTGCCTGTACGGCAGTGCAC
GTTAATTGAAATAAACTTCAATTCGGCATATC
5049650
5049651
TTTCTAAGCTGCCTGTACGGCAGTGCAC
TAAAGCCGAGGCCCTTTGCGACCGTTGTAATG
5049710
5049711
TTTCTAAGCTGCCTGTACGGCAGTGCAC
CAATGACATCTTTCAATGAGAGTTTCTTCATT
5049770
5049771
TTTCTAAGCTGCCTGTACGGCAGTGCAC
ATTCCATTATGCCACCTATGAGTTTAGGTCAT
5049830
5049831
TTTCTAAGCTGCCTGTACGGCAGTGCAC
TAAGTCGTTGCTTACAACACGAGCAATTAAAA
5049890
5049891
TTTCTAAGCTGCCTGTACGGCAGTGCAC
AATAAAGCAGCGGTTTCTTGTTGCCCATTTTT
5049950
5049951
TTTCTAAGCTGCCTGTACGGCAGTGCAC
5049978
Left flanking sequence : Till position 5048451 (length
bp)
CCTTCCCTAGATGAGTTAGCAGAATCCATCCGTAATCAGTTACTGGCTCCACGACTGCGCAATTAACCTA
TATTATATTTCTCGAAAGGCAGTTACTGGA
Right flanking sequence : From position 5049978 (length
bp)
GGTTGCATATTACCTCTAACCTGCTGACTATCAAAGAGTATAGTTATAAAAAGTGAAAAAACCCTTTTTA
TAAGGGCTAATTTATTTTACTTTAAAATCA
Print the CRISPR sequence : From position
bp To position
bp