Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP011995_5                                                                                                                 top


Strain : Porphyromonas gingivalis GCF_001263815 RefSeq :NZ_CP011995 (chromosome circular)
CRISPR id : NZ_CP011995_5
DR consensus (37 bp) : GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGNumber of repetitions :7
Begin Position : 2090754 End Position : 2091230

2090754GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGAACGTATTACTAAAGCAGAAAAACAAGCATTTGT2090824
2090825GTCTTAATAGCCTTACAGACTGTGTATGTATAGTGAGAAAATTAATTGAACTTATAAAATGTTCTTAATCT2090895
2090896GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGTGCAGGGAGTTGGTTCAGCAAAAACCCCGCTGTC2090966
2090967GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGATTGAGGAAGAAGGAGTAGAAAAGCCCTATACTCACAA2091041
2091042GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGACAAGTATTAATGATGGTATAGCTATAATGCTTAGA2091114
2091115GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGTTTTTGGGTAGGGCTTTATCAGATGATAGCAACGATGATAG2091192
2091193GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG2091229
Left flanking sequence : Till position 2090754 (length bp)
GCCATAGAGCACAGAAGCCCGGGGGCATGCGCTTAAGATTGTAGGCCATCGCTTCCAGAACACTCTGTGT
ATGCGTTCGTTCTAACCCTCGGTAATCAAT
Right flanking sequence : From position 2091230 (length bp)
TTTATAGAGAGGGGAATTAAGAAGGGCTGTCAAAGTCTTAATAGCCTTGTGTATGTATAGTGAGCCAACA
GTAAAACTGGCTTTTGGTAAGGAAATCGAC
Print the CRISPR sequence : From position bp To position bp