Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP012090_3                                                                                                                 top


Strain : Mycobacterium tuberculosis W-148 GCF_000193185 RefSeq :NZ_CP012090 (chromosome circular)
CRISPR id : NZ_CP012090_3
DR consensus (36 bp) : GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACNumber of repetitions :15
Begin Position : 2893858 End Position : 2894928

2893858GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTCGGGCACGGCCGAAACACCGCGCGAAGGGCGGTTCAA2893931
2893932GTTTCCGTCCCCTCTCGTGGTTTTGGGTCTGACGACTGGGAGGATGTCACTCGGACATAGCTGTCATCGGCGGTGT2894007
2894008GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGAGGACATGGAGCAGTAGCGTGGCTGTGGTGTGGCGGGCGATATGC2894083
2894084GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTGCTGCACCTCCCGCACCCGGTGCGATTCTGCGTCCA2894156
2894157GTTTCCGTCCCCTCTCGGGGTTTTGGGTCCGACGACCCCGATAGTCGCGCTCGTCCATGTCCCACCATGAGG2894228
2894229GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTACCTGATAGAAGCCGGAAAGCTCCGTGCCGTCAG2894299
2894300GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACAGGGCACTGGACCTGTATGAGGCACAGATGGCGTACTA2894373
2894374GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCCGGATCGGTTACCCACGCCGATTTACTGGCCATCGTCGG2894449
2894450GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACACTTGCGCGCACAACGCATCCGCCATCCACGGGGC2894520
2894521GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCTGAAAGGGGGACTGTGGACGAGTTCGCGCTCAAAAT2894593
2894594GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACGCGAGAATAAGATTGTCAGGCTGGTGCTGCGTTTCCGT2894667
2894668GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACACTCTCAACCGCGCCACGCTCAAAAAAAGTGTTATTGA2894741
2894742GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCCGCTGGGGGCAGGCCCAGGTGGGACGGTTCCTCGC2894813
2894814GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTTCGGGAGCATGCCGCAGCTGCGGATGTGGTGCTGGATTTCGA2894892
2894893GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC2894928
Left flanking sequence : Till position 2893858 (length bp)
GGCGGGGTCATTTCATGACCAAACGTCCTCACCGTCAACGCCGCCATCATGCTCATCCTGAATGCCGGTC
AACAGACGCGGTGGCGACCCAGTCGTCGTA
Right flanking sequence : From position 2894928 (length bp)
ACGTTGGAAGCGTTTCGAGCGTACGGACTTTCCGGATGCAGGTTTCCGTCCCCTCTCTGAACCGCCCCGG
CATGTCCGGAGACTCCAGTTCTTGGAAAGG
Print the CRISPR sequence : From position bp To position bp