Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP012174_5                                                                                                                 top


Strain : Metallosphaera sedula ARS120-1 GCF_001266695 RefSeq :NZ_CP012174 (chromosome circular)
CRISPR id : NZ_CP012174_5
DR consensus (30 bp) : GTTTCAAACCCTCGAAGGATCTCTACAAACNumber of repetitions :8
Begin Position : 1136108 End Position : 1136623

1136108GTTTCAAACCCTCGAAGGATGTCTACAAACGACACGTCTACACCCCCCCCCCGGTCGTGAGTGTGGGAAGCGGGGATCCC1136187
1136188ATTTCAAACCCTCCAAGGATGTCTACAAACTGGGGTCCATTGTGATGAAGATTTCGGAGAAATTGAAGA1136256
1136257GTTTCAAACCCTCGAAGGATCTCTACAAACTCCCCTGTTACGACTGAACCAATACTTGATTGCACGT1136323
1136324GTTTCAAACCCTCGAAGGATCTCTACAAACCTCTACACACTAAGAGTAGCTGAGACCATAAAAACCAA1136391
1136392GTTTCAAACCCTCGAAGGATCTCTACAAACACATCATAGCCATGTCACCGAACGGAACTCTGAGGTACTT1136461
1136462GTTTCAAACCCTCGAAGGATCTCTACAAGCATTCAACTAGTGGCGTCTCCTGAAGGGCAACTATT1136526
1136527GTTTCAAACCCTCGAAGGATCTCTACAAGAAGGGCTATTCTGCGTACGCTTCCCACCTCTGGAGGCA1136593
1136594GTTTCAAACCCTCATAGGATCTCTACAAAC1136623
Left flanking sequence : Till position 1136108 (length bp)
AGTTAAATAGGGATCTAGGCTCAGCTTCTAAAGCTACCCTTGATGGGTCGGCCCAGGTAATTCATCACCT
GAGCCCATTCTCTAGTTTAACTAAAAGCAT
Right flanking sequence : From position 1136623 (length bp)
CGCTCTTATTTGTTATTGATAGCCAGCCCTAAAAAACCTTACCCTAGTATAGATGATAGAACTTGAGCGG
GTCCATCCTCGTCCTTGAGAGCACGTCGTG
Print the CRISPR sequence : From position bp To position bp