Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP012426_2                                                                                                                 top


Strain : Klebsiella pneumoniae strain KP5 GCF_001855315 RefSeq :NZ_CP012426 (chromosome circular)
CRISPR id : NZ_CP012426_2
DR consensus (29 bp) : GTGTTCCCCGCGCCAGCGGGGATAAACCGNumber of repetitions :44
Begin Position : 3876864 End Position : 3879513

3876864GTGTTCCCCGCGCCAGCGGGGATAAACCGGAGCAGGCACCCGCCGCAACGACGAAGAGCGC3876924
3876925GTGTTCCCCGCGCCAGCGGGGATAAACCGAAATCAGCCAGCACCACGATTCTGGGAAATTT3876985
3876986GTGTTCCCCGCGCCAGCGGGGATAAACCGACAGGCTTACCCGTATTGAGACGGTTGCTGAA3877046
3877047GTGTTCCCCGCGCCAGCGGGGATAAACCGGAAACCCCATCAGATGACCCTCCCCATGTTGGC3877108
3877109GTGTTCCCCGCGCCAGCGGGGATAAACCGTTGCCTGGTCTGCTTGGTGATGATCCGTGGTA3877169
3877170GTGTTCCCCGCGCCAGCGGGGATAAACCGTACAGAACGACTGAGGCGGCGTGTATTGCATA3877230
3877231GTGTTCCCCGCGCCAGCGGGGATAAACCGGATCTTAACTCTATTGCCAATGGCGCAATTCA3877291
3877292GTGTTCCCCGCGCCAGCGGGGATAAACCGGGCGATGCGCGCTCTGCTGGCTATCGGTAAAA3877352
3877353GTGTTCCCCGCGCCAGCGGGGATAAACCGAATGCAGCAACCGGCAAATATATCGCCGGTAA3877413
3877414GTGTTCCCCGCGCCAGCGGGGATAAACCGGGGCTGCCGCACGCCTGGGACGAGTCGAGCCC3877474
3877475GTGTTCCCCGCGCCAGCGGGGATAAACCGCCGCAATAACAAAAATAAATGAGGGTTAAAGT3877535
3877536GTGTTCCCCGCGCCAGCGGGGATAAACCGGTAAATGGGAATGAGTAGAAGAGCGTCATTGG3877596
3877597GTGTTCCCCGCGCCAGCGGGGATAAACCGCCCCCGCGCACATGCTTAAACGCGCTATCACG3877657
3877658GTGTTCCCCGCGCCAGCGGGGATAAACCGGGCATCTGTTGTGTAATGTTGAGTTTTTTTCA3877718
3877719GTGTTCCCCGCGCCAGCGGGGATAAACCGCAGGTTAAACATGTAAAAAATGACCGTCGCCG3877779
3877780GTGTTCCCCGCGCCAGCGGGGATAAACCGCACATTGCCCGGTCTGAAAAGTATTTGAAAAT3877840
3877841GTGTTCCCCGCGCCAGCGGGGATAAACCGTCCGCACAGTCAAACGCTCCAGACACCAACCC3877901
3877902GTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGAACACCACCAGTAACAGCTACTGTAGGC3877962
3877963GTGTTCCCCGCGCCAGCGGGGATAAACCGTGACCCTGTTGATTTTGTTCCAGGTAATACGT3878023
3878024GTGTTCCCCGCGCCAGCGGGGATAAACCGTTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT3878084
3878085GTGTTCCCCGCGCCAGCGGGGATAAACCGGAACCTGAATTCGAAGGGTGGGTCATCCTTCC3878145
3878146GTGTTCCCCGCGCCAGCGGGGATAAACCGGGACCCCGAGCGACCCGGTCACCCTCCGACCT3878206
3878207GTGTTCCCCGCGCCAGCGGGGATAAACCGCCGTCGAACGGCGGTTATATCCATCTTGAGTC3878267
3878268GTGTTCCCCGCGCCAGCGGGGATAAACCGACCGATCCCACAATTGCGGCGGTTGAGATTGA3878328
3878329GTGTTCCCCGCGCCAGCGGGGATAAACCGGTTGGTAATTACTGCTGTGTGTTACGGATAAA3878389
3878390GTGTTCCCCGCGCCAGCGGGGATAAACCGCCGATTGTCTGGCGGTCGAGCGCCATTTGCTC3878450
3878451GTGTTCCCCGCGCCAGCGGGGATAAACCGTGCCGGACGTTGTACCTGTGAGTTAATTCTTC3878511
3878512GTGTTCCCCGCGCCAGCGGGGATAAACCGCGATAACCGGGCGTTTCGACTGAACTCACCTC3878572
3878573GTGTTCCCCGCGCCAGCGGGGATAAACCGTTAATACCAGGGGGCAGGTTCAGCAGGTCCCC3878633
3878634GTGTTCCCCGCGCCAGCGGGGATAAACCGCCGCTTTAACCCGCTCCGGCAGATCCGGGTGA3878694
3878695GTGTTCCCCGCGCCAGCGGGGATAAACCGCCCTCCGCTTTCAGGGTGTGGCTGATATCACC3878755
3878756GTGTTCCCCGCGCCAGCGGGGATAAACCGCGCGCTGCGAATTTGTTGGTCGATTTCGATCT3878816
3878817GTGTTCCCCGCGCAAGCGGGGATAAACCGTGGGTAGAGGTTAACTGGTTATTGGTCATTGA3878877
3878878GTGTTCCCCGCGCCAGCGGGGATAAACCGATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG3878938
3878939GTGTTCCCCGCGCCAGCGGGGATAAACCGCCGTTGTCAATATCTCCCGGCGTCCGCGCCAG3878999
3879000GTGTTCCCCGCGCCAGCGGGGATAAACCGCACGTCCGGAAACCACGGGTTATCCGTGTAAT3879060
3879061GTGTTCCCCGCGCCAGCGGGGATAAACCGCAGAGGTCCTTATCTTTTCAACGTCAAAGTCG3879121
3879122GTGTTCCCCGCGCCAGCGGGGATAAACCGGCAATCCCAGAGCGCGAATATCTTGGGCTCTC3879182
3879183GTGTTCCCCGCGCCAGCGGGGATAAACCGGACATGGCGCGCGAGTTTATCGACGCCTGCGC3879243
3879244GTGTTCCCCGCGCCAGCGGGGATAAACCGGGGATGAGCGTTTTCCGGTGGATTCTGATGTG3879304
3879305GTGTTCCCCGCGCCAGCGGGGATAAACCGGTGATCGTCATGGATATCACTGCCGTTCCGTC3879365
3879366GTGTTCCCCGCGCCAGCGGGGATAAACCGCAGACAGACAGCAGGCAGCAAACAGGGAAGAC3879426
3879427GTGTTCCCCGCGCCAGCGGGGATAAACCGGGGTTCACTTGGGTGAAACTGAACTAACT3879484
3879485GTGTTCCCCGCATTCGCGAGGATAAGCCC3879513
Left flanking sequence : Till position 3876864 (length bp)
ATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAA
GCTATTATAAAACAGTAATATATCTTTAGT
Right flanking sequence : From position 3879513 (length bp)
GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGC
TCTAGCGATATCACTGTTTTTTTACCGTCT
Print the CRISPR sequence : From position bp To position bp