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CRISPRs details
NZ_CP012603_6
Flanking alignement tool
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NZ_CP012603_6                                                                                                                 
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Strain :
Leptospira interrogans serovar Hardjo Norma Norma Cattle GCF_001293065
RefSeq :
NZ_CP012603 (chromosome circular)
CRISPR id :
NZ_CP012603_6
DR consensus (36 bp) :
CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC
Number of repetitions :
12
Begin Position :
3284965
End Position :
3285794
3284965
CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC
CCAGCGGGATTCTTGGAAATAAATTACTCAACAAA
3285035
3285036
CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC
TTAAATCGGAAGCATGTTGCGACTCGATTTCGAAAT
3285107
3285108
CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC
CAAATATTCATGGCGCCTTGTCTCCCTGGGCTTCACA
3285180
3285181
CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC
TTTTGGACAACAACTTCCTCGCTCCCCGCATGTTCT
3285252
3285253
CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC
TAACAACATAGTCTTTAGAGATAGAGGCCATGACAAG
3285325
3285326
CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC
ACATACTAATTTTTGATCCAACTGTTGTTGTGTTAAT
3285398
3285399
CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC
ACAAAAAAAGACAAGTTGGTCCGGAATGCGTTTGGC
3285470
3285471
CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC
CTAGAGTGGCGTGAATTTTTGCATGAGTTGACCCTT
3285542
3285543
CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC
TATCGTTATCCGCCAAGGCGTTATCAGTTCTACAAT
3285614
3285615
CTGAATATAACTTTGATGCCGGTAGGCGTTGAGCAC
TTAACAACCATATCTGTAGTCTTATATGCAATTTT
3285685
3285686
CTGAATATAACTTTGATGCCGGTAGGCGTTGAGCAC
ATCGGAATATTTGCCCCTTTTGTATCATAGTCGTAA
3285757
3285758
CTGAATATAACTTTGATGCCGTTAGGCGATTTAGAC
3285793
Left flanking sequence : Till position 3284965 (length
bp)
ACATGAAAAATAACGATAAAAAACGATATACTTGTTCTCCTCCTTTGAAAACACTCATATCCACAATTTA
TGCTTATAAAAGCCATTTAAATAAAATGCT
Right flanking sequence : From position 3285794 (length
bp)
AAGAGAAGATTTGTTTTAGCCCAAATTGTTTCGCACCAAACGTGCAAACAGATAAAATGTAGGAACTACT
ACTTTTCCGAAAAACTGTGCTTTGTTCAAA
Print the CRISPR sequence : From position
bp To position
bp