Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP013245_5                                                                                                                 top


Strain : Pseudomonas aeruginosa GCF_001447845 RefSeq :NZ_CP013245 (chromosome circular)
CRISPR id : NZ_CP013245_5
DR consensus (28 bp) : GTTCACTGCCGTGTAGGCAGCTAAGAAANumber of repetitions :10
Begin Position : 5802543 End Position : 5803110

5802543GTTCACTGCCGTGTAGGCAGCTAAGAAAAGTGCTGGAGCAGCACCCGGACGAAAGCGAAG5802602
5802603GTTCACTGCCGTGTAGGCAGCTAAGAAAATCTCGATTGCGCCGGATGGGGCGCCCCTGTG5802662
5802663GTTCACTGCCGTGTAGGCAGCTAAGAAAACCAGCGGCTTTGGCACCTGGAACCCCGGAAA5802722
5802723GTTCACTGCCGTGTAGGCAGCTAAGAAATGCAGCATCAGCCCGCTCATGCTGGCCACCAC5802782
5802783GTTCACTGCCGTGTAGGCAGCTAAGAAATCGGGAGGCCGGCACCGGATGCAGTTGCATTG5802842
5802843GTTCACTGCCGTGTAGGCAGCTAAGAAAATGTTGACCGCAGGGTTCTCGACCAAGTATCC5802902
5802903GTTCACTGCCGTGTAGGCAGCTAAGAAAAGGCCGTTGGCCGCCGCGTATTCCGGCCAGTG5802962
5802963GTTCACTGCCGTGTAGGCAGCTAAGAAATGGGTGTGCAGGTTGGCAAATGCCAGCACGCA5803022
5803023GTTCACTGCCGTGTAGGCAGCTAAGAAATATCCGAGTTTCCCAGACCTACGAAATAGTCA5803082
5803083GTTCACTGCCGTGTAGGCAGCTAAGAAA5803110
Left flanking sequence : Till position 5802543 (length bp)
TATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTT
CCTTCAAATGGTTATAGGTTTTCGGAGCTA
Right flanking sequence : From position 5803110 (length bp)
CTCGAACCCACCTCGGCCACAACAGCCGCCGGGTTCGCTGCCGTCTAGGCAGAACCACCCTCCCCATCCC
ACTACCAAACATCCGAATATAAAGTTCCTA
Print the CRISPR sequence : From position bp To position bp