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CRISPRs details
NZ_CP013677_1
Flanking alignement tool
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NZ_CP013677_1                                                                                                                 
top
Strain :
Xanthomonas oryzae pv. oryzae GCF_001746695
RefSeq :
NZ_CP013677 (chromosome circular)
CRISPR id :
NZ_CP013677_1
DR consensus (31 bp) :
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
Number of repetitions :
80
Begin Position :
865655
End Position :
870855
865655
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGCCAGCCTGCGCCGACACCGACCCCGGGCACTC
865719
865720
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TCTGCGACGGGGTTACCAGCTCCAGCCCGTCGCG
865784
865785
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGTATCCCAGCAAAGACTTGCTCATACCCGTCGGGC
865851
865852
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGCGGACAACATTGTGGGTCTTCCGGGATGCGGT
865916
865917
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TCGCACCGACAGCGCCCTGATTGAGTATGTGCAG
865981
865982
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GTGGCGCGAGCGCTATAACAAGCGCTCGTTCTACGT
866048
866049
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CGCTTCACGGGCCGTGGATACGTTACTACCCAT
866112
866113
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TTGGATCGAACCGGAGGAACGCGCCTTGAGGTCGG
866178
866179
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TCCCACCGGTCGCCCAGGGCGAGCGGCTTGAACGT
866244
866245
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCGGTCGTTTCGCCTGCGACTCGACGTGGGCCAC
866309
866310
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CAGCAGCGTGCCCGCGCCGTTCCGCGTATAGAAC
866374
866375
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ATGAGCATCCAGGTCGTCCCGCTCGCCCCGCGCCC
866440
866441
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GACAGCGGCGCGCAAGTCACGAACGTCAGCATCCA
866506
866507
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCAACGCATCAGGCGTTGGGCAATGCCGCACGAT
866571
866572
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCGGCCTTTTCAGCGATGCAGAAACGCAGATGGT
866636
866637
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCAACCTTAAGATCACCCTCCACGCTCCGTATA
866700
866701
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGTCCACATATCCACGGTCCTTTGTGGGCGATCTA
866766
866767
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CAGCACAGCCGACAACGCCTGTTCCAGCACCATCAC
866833
866834
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TTGCTTGCTGATCTGCGCATGCGCGCTCATGAAAT
866899
866900
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCCGCGCCGATCATCACCAGCGAGGGTCCAATCTT
866965
866966
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ACGCGTGCAGACGCTTTGACAGCGCGCAACACCT
867030
867031
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGGTGAAATTGTAGAAGCATCCATCGTCACAACTA
867096
867097
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGCTACAGCGCCTTCGTAGAGGCTGGCCAACGTCGG
867163
867164
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
AGCGCCCCTACGGATAACGCTCCACACGCGCTGA
867228
867229
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CAGCAATGCAACGTTTCAGAGGTTTCGCGTTGGC
867293
867294
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCCACTGCGTGGCCCTGGACCGCGCCTATTCGTGA
867359
867360
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GAGGAGTTGGAGCGGGCAGGTGCCCCCTTGGCGCG
867425
867426
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGCAACCGAACGCCATCACCCTGTCGAACGATGT
867490
867491
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CTACGGGGACTACAGCGCCAACGGCATGAGCAAGGC
867557
867558
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGTCATCACCGTGGCCATCACCATCACCGGGCGTG
867623
867624
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCCGGCGAAGTGGCGTATACATCTCCGGGATTAAG
867689
867690
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCAGGATGAGTCGGGTAAGTGGTGTATTCCAGAC
867754
867755
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
AGTGGGATACCCTTGCGCTCGGCACTGTCCGTGG
867819
867820
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
AGGATCTGGAGCTGATGGATCAACCAATGTGAC
867883
867884
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCAGGTGTATACAGTAACTGCGGACCTAACAGCA
867948
867949
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TTCCGCGCTGGTCCTATGCCAACAAGATCAAGCTT
868014
868015
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CCCTCCAGCAACGCGCATTGCCCTAGAGTCGGCG
868079
868080
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ATACGGCGCAGCCAGGGCGACAGAGTCATAGTCA
868144
868145
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CCGTCGCGGTCGGTGATACGCACGCGCCACAGGT
868209
868210
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CCTGCTCGATCGTCCAGTTATCGCTATAAGACCCCG
868276
868277
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGGGGTCGGCGCGATCTTTGGTGAAGTAATGCAC
868341
868342
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CCATCACCGGGCGTGGAAGGTGGCGCGTCACCAACA
868408
868409
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ACTGCTGTGCCCAATCATGCTCGGCGGGACGCCGAA
868475
868476
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
AATCGGGTGGGATATCTGCATATACTCTGCCACC
868540
868541
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CCTGCACCGCCGCCGATACCGCCAAGCACAGTGCT
868606
868607
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ATGAGGGGTATTGCAAAGCTAAGGGCTGCAAGGT
868671
868672
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CCTTCTGACATTCCCGCCACAGCGCCTTGCCCGC
868736
868737
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CGCTGAGGCTGTTGTAATCCACGCCGAAAGCAGCAGA
868804
868805
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
AAAGATCTGCGCAGCCAGGTCAAAGGCGCCAACCAA
868871
868872
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TTGTGCTCAACATCCCCTAAAAATGCTGCACCCA
868936
868937
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGGCTTATGATCCCCTGACGGGTGTGTTACGGTG
869001
869002
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
AACAGCGCTGACCTCTGCTTAGGACTTGCCCAGTT
869067
869068
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TCCGCCGTCCCTCTAGCCTGAGCTTGTTTTTAG
869131
869132
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CGCCACGGTCAACAGCTGTGCAGAGGCAGGCATT
869196
869197
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TCAGTCTGCTTGCCACTCTCAACAAGTGACTGCAC
869262
869263
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GTGTGATTATGGAAGAGCCACGGAGGATAAGCAC
869327
869328
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGGCTCAGGGATCAACCCACAGGGCTCGGACTTGCA
869394
869395
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TCCCCAGTACCTTTCGTGTTCACGCTCAAAACC
869458
869459
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CACCTCAGTGGGCGGTTCGACAAAGTGTTCGGGCAG
869525
869526
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TACGGTATTTGTAGATAAACTCCTGCACCCTGA
869589
869590
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CACCCATACCAGTGTCATTTTTGGGGTTGGTATA
869654
869655
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGCCATAGGTGACGACGCTGACGCTGTAACCAAGG
869720
869721
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
AGCGGCACACCTGAACTCTATGGGTCTTTGGAAA
869785
869786
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCTAGCCTATTGGCAAGCACGCTCGCAGACACT
869849
869850
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ACATGCACCCGCCTTGGCCGTCTTGCTGTCCTT
869913
869914
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TATTGGCCTGTCCCTGGATCAATGCCCGCACCGT
869978
869979
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CGGTGTGCAGCTAACCTTTAGCAGCACGGCAAC
870042
870043
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ACCAACGGATTTCCTGAAGATTGCAGAGTATCCA
870107
870108
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ATAAGCGTCGGTTCGGGGTACTCTACGAACATCCA
870173
870174
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ATATGAGAGATACTTACTGAGTGTAGAGCAAGA
870237
870238
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TACCCAACTACTGAGACAGAGAGACTAGACAAT
870301
870302
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCATTGTTGTAGGAGACGCCGTGGGTGCTGTTGGT
870367
870368
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGCACAAACGCAAGGCCTCACCATTTGATGTCCA
870432
870433
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TACGCCATCGTGGCGAAGAGGACACAGCAACGGCTT
870499
870500
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGTAAGGCGCCGCCAGCCTGACTATCCACATCAGT
870565
870566
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TCCCATTGGTCGTAGATTTGCGCAGCCAAGTC
870628
870629
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CATTTGGCGTGCCAGACAGCTGGCCGGTAGCCTT
870693
870694
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CGCTCCGCCGACATAATGTACGTCGAGTAAAATGC
870759
870760
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CGGATCAAACTCTCACCATTGTGAGGGCACTCGG
870824
870825
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
870855
Left flanking sequence : Till position 865655 (length
bp)
GTTGTCCGACATTGCAGCTCGACCAGAATTGGTGCGCTCGTTCTTCACGCATCCAAGTGTCGCCTATATT
TCTGACTTATGAGTAATGCTGACGCGTCAT
Right flanking sequence : From position 870855 (length
bp)
CCCGCCAGCATAAGTGCTTGCGCGTCTTGAGGGAAAACCCGTCATTTCGCGAACAGGAACGCGAACAGGT
TCCATGCCTTGCAAATATGAGCACCCGCGA
Print the CRISPR sequence : From position
bp To position
bp