Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation


Other Tools


GPMS Links





NZ_CP013679_1                                                                                                                 top


Strain : Xanthomonas oryzae pv. oryzae GCF_001746735 RefSeq :NZ_CP013679 (chromosome circular)
CRISPR id : NZ_CP013679_1
DR consensus (31 bp) : GTTTCAATCCACGCGCCCGTGAGGACGCGACNumber of repetitions :78
Begin Position : 867936 End Position : 873010

867936GTTTCAATCCACGCGCCCGTGAGGACGCGACGGCCAGCCTGCGCCGACACCGACCCCGGGCACTC868000
868001GTTTCAATCCACGCGCCCGTGAGGACGCGACTCTGCGACGGGGTTACCAGCTCCAGCCCGTCGCG868065
868066GTTTCAATCCACGCGCCCGTGAGGACGCGACGGTATCCCAGCAAAGACTTGCTCATACCCGTCGGGC868132
868133GTTTCAATCCACGCGCCCGTGAGGACGCGACGGCGGACAACATTGTGGGTCTTCCGGGATGCGGT868197
868198GTTTCAATCCACGCGCCCGTGAGGACGCGACTCGCACCGACAGCGCCCTGATTGAGTATGTGCAG868262
868263GTTTCAATCCACGCGCCCGTGAGGACGCGACGTGGCGCGAGCGCTATAACAAGCGCTCGTTCTACGT868329
868330GTTTCAATCCACGCGCCCGTGAGGACGCGACCGCTTCACGGGCCGTGGATACGTTACTACCCAT868393
868394GTTTCAATCCACGCGCCCGTGAGGACGCGACTTGGATCGAACCGGAGGAACGCGCCTTGAGGTCGG868459
868460GTTTCAATCCACGCGCCCGTGAGGACGCGACTCCCACCGGTCGCCCAGGGCGAGCGGCTTGAACGT868525
868526GTTTCAATCCACGCGCCCGTGAGGACGCGACGCGGTCGTTTCGCCTGCGACTCGACGTGGGCCAC868590
868591GTTTCAATCCACGCGCCCGTGAGGACGCGACCAGCAGCGTGCCCGCGCCGTTCCGCGTATAGAAC868655
868656GTTTCAATCCACGCGCCCGTGAGGACGCGACATGAGCATCCAGGTCGTCCCGCTCGCCCCGCGCCC868721
868722GTTTCAATCCACGCGCCCGTGAGGACGCGACGACAGCGGCGCGCAAGTCACGAACGTCAGCATCCA868787
868788GTTTCAATCCACGCGCCCGTGAGGACGCGACGCGGCCTTTTCAGCGATGCAGAAACGCAGATGGT868852
868853GTTTCAATCCACGCGCCCGTGAGGACGCGACGCAACCTTAAGATCACCCTCCACGCTCCGTATA868916
868917GTTTCAATCCACGCGCCCGTGAGGACGCGACCGTTAATCGCCGACCAGGTGATCACGCCGCGAAA868981
868982GTTTCAATCCACGCGCCCGTGAGGACGCGACTGTCCACATATCCACGGTCCTTTGTGGGCGATCTA869047
869048GTTTCAATCCACGCGCCCGTGAGGACGCGACCAGCACAGCCGACAACGCCTGTTCCAGCACCATCAC869114
869115GTTTCAATCCACGCGCCCGTGAGGACGCGACTTGCTTGCTGATCTGCGCATGCGCGCTCATGAAAT869180
869181GTTTCAATCCACGCGCCCGTGAGGACGCGACGCCGCGCCGATCATCACCAGCGAGGGTCCAATCTT869246
869247GTTTCAATCCACGCGCCCGTGAGGACGCGACGGCCACCGGCTTATTGGGGTCGGCGCGATCTTTGGT869313
869314GTTTCAATCCACGCGCCCGTGAGGACGCGACACGCGTGCAGACGCTTTGACAGCGCGCAACACCT869378
869379GTTTCAATCCACGCGCCCGTGAGGACGCGACTGGTGAAATTGTAGAAGCATCCATCGTCACAACTA869444
869445GTTTCAATCCACGCGCCCGTGAGGACGCGACGGCTACAGCGCCTTCGTAGAGGCTGGCCAACGTCGG869511
869512GTTTCAATCCACGCGCCCGTGAGGACGCGACAGCGCCCCTACGGATAACGCTCCACACGCGCTGA869576
869577GTTTCAATCCACGCGCCCGTGAGGACGCGACCAGCAATGCAACGTTTCAGAGGTTTCGCGTTGGC869641
869642GTTTCAATCCACGCGCCCGTGAGGACGCGACGCCACTGCGTGGCCCTGGACCGCGCCTATTCGTGA869707
869708GTTTCAATCCACGCGCCCGTGAGGACGCGACGAGGAGTTGGAGCGGGCAGGTGCCCCCTTGGCGCG869773
869774GTTTCAATCCACGCGCCCGTGAGGACGCGACTGCAACCGAACGCCATCACCCTGTCGAACGATGT869838
869839GTTTCAATCCACGCGCCCGTGAGGACGCGACCTACGGGGACTACAGCGCCAACGGCATGAGCAAGGC869905
869906GTTTCAATCCACGCGCCCGTGAGGACGCGACGGTCATCACCGTGGCCATCACCATCACCGGGCGTG869971
869972GTTTCAATCCACGCGCCCGTGAGGACGCGACGCCGGCGAAGTGGCGTATACATCTCCGGGATTAAG870037
870038GTTTCAATCCACGCGCCCGTGAGGACGCGACGCAGGATGAGTCGGGTAAGTGGTGTATTCCAGAC870102
870103GTTTCAATCCACGCGCCCGTGAGGACGCGACAGTGGGATACCCTTGCGCTCGGCACTGTCCGTGG870167
870168GTTTCAATCCACGCGCCCGTGAGGACGCGACAGGATCTGGAGCTGATGGATCAACCAATGTGAC870231
870232GTTTCAATCCACGCGCCCGTGAGGACGCGACGCAGGTGTATACAGTAACTGCGGACCTAACAGCA870296
870297GTTTCAATCCACGCGCCCGTGAGGACGCGACTTCCGCGCTGGTCCTATGCCAACAAGATCAAGCTT870362
870363GTTTCAATCCACGCGCCCGTGAGGACGCGACCCCTCCAGCAACGCGCATTGCCCTAGAGTCGGCG870427
870428GTTTCAATCCACGCGCCCGTGAGGACGCGACATACGGCGCAGCCAGGGCGACAGAGTCATAGTCA870492
870493GTTTCAATCCACGCGCCCGTGAGGACGCGACCCGTCGCGGTCGGTGATACGCACGCGCCACAGGT870557
870558GTTTCAATCCACGCGCCCGTGAGGACGCGACCCTGCTCGATCGTCCAGTTATCGCTATAAGACCCCG870624
870625GTTTCAATCCACGCGCCCGTGAGGACGCGACTGGGGTCGGCGCGATCTTTGGTGAAGTAATGCAC870689
870690GTTTCAATCCACGCGCCCGTGAGGACGCGACCCATCACCGGGCGTGGAAGGTGGCGCGTCACCAACA870756
870757GTTTCAATCCACGCGCCCGTGAGGACGCGACACTGCTGTGCCCAATCATGCTCGGCGGGACGCCGAA870823
870824GTTTCAATCCACGCGCCCGTGAGGACGCGACAATCGGGTGGGATATCTGCATATACTCTGCCACC870888
870889GTTTCAATCCACGCGCCCGTGAGGACGCGACCCTGCACCGCCGCCGATACCGCCAAGCACAGTGCT870954
870955GTTTCAATCCACGCGCCCGTGAGGACGCGACATGAGGGGTATTGCAAAGCTAAGGGCTGCAAGGT871019
871020GTTTCAATCCACGCGCCCGTGAGGACGCGACCCTTCTGACATTCCCGCCACAGCGCCTTGCCCGC871084
871085GTTTCAATCCACGCGCCCGTGAGGACGCGACCGCTGAGGCTGTTGTAATCCACGCCGAAAGCAGCAGA871152
871153GTTTCAATCCACGCGCCCGTGAGGACGCGACAAAGATCTGCGCAGCCAGGTCAAAGGCGCCAACCAA871219
871220GTTTCAATCCACGCGCCCGTGAGGACGCGACTTGTGCTCAACATCCCCTAAAAATGCTGCACCCA871284
871285GTTTCAATCCACGCGCCCGTGAGGACGCGACTGGCTTATGATCCCCTGACGGGTGTGTTACGGTG871349
871350GTTTCAATCCACGCGCCCGTGAGGACGCGACAACAGCGCTGACCTCTGCTTAGGACTTGCCCAGTT871415
871416GTTTCAATCCACGCGCCCGTGAGGACGCGACTCCGCCGTCCCTCTAGCCTGAGCTTGTTTTTAG871479
871480GTTTCAATCCACGCGCCCGTGAGGACGCGACCGCCACGGTCAACAGCTGTGCAGAGGCAGGCATT871544
871545GTTTCAATCCACGCGCCCGTGAGGACGCGACTCAGTCTGCTTGCCACTCTCAACAAGTGACTGCAC871610
871611GTTTCAATCCACGCGCCCGTGAGGACGCGACGTGTGATTATGGAAGAGCCACGGAGGATAAGCAC871675
871676GTTTCAATCCACGCGCCCGTGAGGACGCGACGGGCTCAGGGATCAACCCACAGGGCTCGGACTTGCA871742
871743GTTTCAATCCACGCGCCCGTGAGGACGCGACTCCCCAGTACCTTTCGTGTTCACGCTCAAAACC871806
871807GTTTCAATCCACGCGCCCGTGAGGACGCGACCACCTCAGTGGGCGGTTCGACAAAGTGTTCGGGCAG871873
871874GTTTCAATCCACGCGCCCGTGAGGACGCGACTACGGTATTTGTAGATAAACTCCTGCACCCTGA871937
871938GTTTCAATCCACGCGCCCGTGAGGACGCGACCACCCATACCAGTGTCATTTTTGGGGTTGGTATA872002
872003GTTTCAATCCACGCGCCCGTGAGGACGCGACTGCCATAGGTGACGACGCTGACGCTGTAACCAAGG872068
872069GTTTCAATCCACGCGCCCGTGAGGACGCGACAGCGGCACACCTGAACTCTATGGGTCTTTGGAAA872133
872134GTTTCAATCCACGCGCCCGTGAGGACGCGACGCTAGCCTATTGGCAAGCACGCTCGCAGACACT872197
872198GTTTCAATCCACGCGCCCGTGAGGACGCGACACATGCACCCGCCTTGGCCGTCTTGCTGTCCTT872261
872262GTTTCAATCCACGCGCCCGTGAGGACGCGACTATTGGCCTGTCCCTGGATCAATGCCCGCACCGT872326
872327GTTTCAATCCACGCGCCCGTGAGGACGCGACCGGTGTGCAGCTAACCTTTAGCAGCACGGCAAC872390
872391GTTTCAATCCACGCGCCCGTGAGGACGCGACACCAACGGATTTCCTGAAGATTGCAGAGTATCCA872455
872456GTTTCAATCCACGCGCCCGTGAGGACGCGACATAAGCGTCGGTTCGGGGTACTCTACGAACATCCA872521
872522GTTTCAATCCACGCGCCCGTGAGGACGCGACTACCCAACTACTGAGACAGAGAGACTAGACAAT872585
872586GTTTCAATCCACGCGCCCGTGAGGACGCGACGCATTGTTGTAGGAGACGCCGTGGGTGCTGTTGGT872651
872652GTTTCAATCCACGCGCCCGTGAGGACGCGACTGCACAAACGCAAGGCCTCACCATTTGATGTCCA872716
872717GTTTCAATCCACGCGCCCGTGAGGACGCGACTACGCCATCGTGGCGAAGAGGACACAGCAACGGCTT872783
872784GTTTCAATCCACGCGCCCGTGAGGACGCGACAGGGGGTGCAGCTGACCTTTAGCAGCACGACGAC872848
872849GTTTCAATCCACGCGCCCGTGAGGACGCGACTGTGGGCCTACCTGGCTGCGGCGAAGTGGCAGCT872913
872914GTTTCAATCCACGCGCCCGTGAGGACGCGACGAATTTTGAGTCTGTTGACCACTTGGGACGACCAG872979
872980GTTTCAATCCACGCGCCCGTGAGGACGCGAC873010
Left flanking sequence : Till position 867936 (length bp)
GTTGTCCGACATTGCAGCTCGACCAGAATTGGTGCGCTCGTTCTTCACGCATCCAAGTGTCGCCTATATT
TCTGACTTATGAGTAATGCTGACGCGTCAT
Right flanking sequence : From position 873010 (length bp)
CCCGCCAGCATAAGTGCTTGCGCGTCTTGAGGGAAAACCCGTCATTTCGCGAACAGGAACGCGAACAGGT
TCCATGCCTTGCAAATATGAGCACCCGCGA

Print the CRISPR sequence : From position bp To position bp