Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP013685_1                                                                                                                 top


Strain : Salmonella enterica subsp. enterica serovar Newport GCF_001922165 RefSeq :NZ_CP013685 (chromosome circular)
CRISPR id : NZ_CP013685_1
DR consensus (29 bp) : GTGTTCCCCGCGCCAGCGGGGATAAACCGNumber of repetitions :20
Begin Position : 1494558 End Position : 1495744

1494558GTGTTCCCCGCGCCAGCGGGGATAAACCGTGCTGGCGGCAAAAGAACTCGCTAAATGGGAA1494618
1494619GTGTTCCCCGCGCCAGCGGGGATAAACCGCAGTGCGGCAGCGCGCAATCGAGACACGCCAT1494679
1494680GTGTTCCCCGCGCCAGCGGGGATAAACCGCACAAAACGCCAGTGGCATGGTACAACCCGTA1494740
1494741GTGTTCCCCGCGCCAGCGGGGATAAACCGGCGTGACCATGTTTAACTCTAAATCAGGCCGT1494801
1494802GTGTTCCCAGCGCCAGCGGGGATAAACCGTCATGCTTTCGACTAAATACTACCGCGACAAC1494862
1494863GTGTTCCCCGCGCCAGCGGGGATAAACCGAAAATAACAACATTATCAGTGTGAAAAGTCTC1494923
1494924GTGTTCCCCGCGCCAGCGGGGATAAACCGAGATATGAAAAACGTAAAAATTTACACCGCCA1494984
1494985GTGTTCCCCGCGCCAGCGGGGATAAACCGCAATAGGACAGCCATTCGAGCGCCCAGAGTTT1495045
1495046GTGTTCCCCGCGCCAGCGGGGATAAACCGGTCAGTATGCACTGCTTGATAAAGTCAGGCCA1495106
1495107GTGTTCCCCGCGCCAGCGGGGATAAACCGAACTAACGTCTATAGCTAAATGTAGAGAAAAC1495167
1495168GTGTTCCCCGCGCCAGCGGGGATAAACCGCAGTTTGGAGTCAATGTTATTTCTTCAGGTCA1495228
1495229GTGTTCCCCGCGCCAGCGGGGATAAACCGTCTCGCTGGTTGCTCCAACTCCTGATATGCCG1495289
1495290GTGTTCCCCGCGCCAGCGGGGATAAACCGTAAAAATCTTCTTTCATATAACCGTAAGGGTT1495350
1495351GTGTTCCCCGCGCCAGCGGGGATAAACCGAGGGTTTTGTCACCTCAACGGTCGGGAGTGCA1495411
1495412GTGTTCCCCGCGCCAGCGGGGATAAACCGGTGCAACAGTTTCTTACCGCAAGCAGTTTGAA1495472
1495473GTGTTCCCCGCGCCAGCGGGGATAAACCGATCATCGGGATTCATTTTGTTGTCCGGGTGGC1495533
1495534GTGTTCCCCGCGCCAGCGGGGATAAACCGCGGTGCTCTATGTCTAAAAATAAAAGCGGTTC1495594
1495595GTGTTCCCTGCGCCAGCGGGGATAAACCCAGCACAATCATTATTAGATGAACTTTCATCA1495654
1495655AGTGTTCCCCGCGCAGCGGGGATAAACCGGGGATCGCGCTGGCGGTCGCATCCGTTGCCGT1495715
1495716GTGTTCCCCGCGCCAACAAGGATAGCCGT1495744
Left flanking sequence : Till position 1494558 (length bp)
AGCAAATTAGCTGTTCTTTAATAATTTAAATTGTTGCGATTATGTTGGTAGAATGTAATGCTGATAAAAA
GTAGTTTATAAACAATGATATCCGTTTAGT
Right flanking sequence : From position 1495744 (length bp)
TGCATAATCATAATCTGTGTACCAGTAATGGCAGCTACAAACCTGTAAAGTAAAAAGGCCGCGTTTTCCC
GGGGAGGCTTTTATACAGGAGAAGGCCATG
Print the CRISPR sequence : From position bp To position bp