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CRISPRs details
NZ_CP013828_2
Flanking alignement tool
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NZ_CP013828_2                                                                                                                 
top
Strain :
Ruminiclostridium thermocellum AD2 GCF_000255615
RefSeq :
NZ_CP013828 (chromosome circular)
CRISPR id :
NZ_CP013828_2
DR consensus (30 bp) :
GTTTCAATTCCTCATAGGTACGATAAAAAC
Number of repetitions :
81
Begin Position :
979303
End Position :
984692
979303
GTTTTAATTCCTCATAGGCACGATAAAAAC
AAAACTTACCCGAAAGGGAAACAGCATCGGAATTCAC
979369
979370
GTTTCAATTCCTCATAGGTACGATAAAAAC
ACACCTGAGAAACTCGTGATTGTTCACAAGTACTCAC
979436
979437
GTTTCAATTCCTCATAGGTACGATAAAAAC
TAGTTAAGTTACGCTCATCAGCTATTGCTTTTACTTTGTCA
979507
979508
GTTTCAATTCCTCATAGGTACGATAAAAAC
TCTGTTATCTTTGCCACATAATCTCTCCTTTATAAAT
979574
979575
GTTTCAATTCCTCATAGGTACGATAAAAAC
CCGCAGCAGGGATAGAACTGACAGCAGACTACTGCG
979640
979641
GTTTCAATTCCTCATAGGTACGATAAAAAC
TAAAAACTCAGGAATGATTTGTATTTCACCGTCTACAGTACGA
979713
979714
GTTTCAATTCCTCATAGGTACGATAAAAAC
CCAGCTCATAAAGGATAGGTAAAAAGCTGTCGTCTG
979779
979780
GTTTCAATTCCTCATAGGTACGATAAAAAC
TTTGAAACAGTGAAAAAGATGGGATATACCTTTGTATGT
979848
979849
GTTTCAATTCCTCATAGGTACGATAAAAAC
ACGGAGGATGGGGAACTATTAGCACTACTATTGGATT
979915
979916
GTTTCAATTCCTCATAGGTACGATAAAAAC
GAGTTTGTAGTATCTGATAGGTTCAAGGATGAAAACGG
979983
979984
GTTTCAATTCCTCATAGGTACGATAAAAAC
TAGTATTAGAGAAAACGGGACAGAAGTAACTACAGC
980049
980050
GTTTCAATTCCTCATAGGTACGATAAAAAC
TAAACTGCACGAATAACTTGGATGAATATGTTTTGGG
980116
980117
GTTTCAATTCCTCATAGGTACGATAAAAAC
AATGGCTCGGAGCAGTTCGCATGCTTAGTTGACAA
980181
980182
GTTTCAATTCCTCATAGGTACGATAAAAAC
TACCTGAAGACGTGCTTATTAAGGTTGATGGAAATG
980247
980248
GTTTCAATTCCTCATAGGTACGATAAAAAC
GAAGAGCCCAAGGAAGAAAAGCCTGCGGACAAGCT
980312
980313
GTTTCAATTCCTCATAGGTACGATAAAAAC
TTGCTCCAAGCTACTTGTAGGGGGTGTATATATGGC
980378
980379
GTTTCAATTCCTCATAGGTACGATAAAAAC
CGTCCACTTCTAGCCGCCTTTCGGAGTGTTGACGTCCC
980446
980447
GTTTCAATTCCTCATAGGTACGATAAAAAC
AAAATAAGCGACCTCAAGGCAGCTGGACTGTTAGAT
980512
980513
GTTTCAATTCCTCATAGGTACGATAAAAAC
ACCAAATGTTTCATAAGGTATTGCAAAAATGAAATCTT
980580
980581
GTTTCAATTCCTCATAGGTACGATAAAAAC
GTGTTGAAATTGGCTCAGGCAGCGACAAATTTATTT
980646
980647
GTTTCAATTCCTCATAGGTACGATAAAAAC
GAAGCCTGATAGTCTTAACAGTGTACTTGATCGCA
980711
980712
GTTTCAATTCCTCATAGGTACGATAAAAAC
TGTGATTCCCTATTTTTTTATAATTGCAATTTGTTT
980777
980778
GTTTCAATTCCTCATAGGTACGATAAAAAC
TCATTGGAACTACGGCATGAAGAACTCGCATCGATAGA
980845
980846
GTTTCAATTCCTCATAGGTACGATAAAAAC
GGAGAATTTGTTATGCAACAAGTTGTAAGGTTTGAAA
980912
980913
GTTTCAATTCCTCATAGGTACGATAAAAAC
CGGTTCGGACCAGCAATGAAACGTATCAGAAACTGC
980978
980979
GTTTCAATTCCTCATAGGTACGATAAAAAC
CTGGCCCGCACATTGTTGATGACATCGTTCTCGTTGA
981045
981046
GTTTCAATTCCTCATAGGTACGATAAAAAC
AAATCACTGAACTCAAGCAAATTGATGTGTCAGAATA
981112
981113
GTTTCAATTCCTCATAGGTACGATAAAAAC
CCTTTCTGCGTATAAATGGTTCTAACTCTGCAGGTGG
981179
981180
GTTTCAATTCCTCATAGGTACGATAAAAAC
GCTTCGCAGAAGCAGGAACAACTTTGGCAGGAAAGCC
981246
981247
GTTTCAATTCCTCATAGGTACGATAAAAAC
CAACCTGGCGCTCATATCGATGGCCGAATCGCTGGAAT
981314
981315
GTTTCAATTCCTCATAGGTACGATAAAAAC
TTACTTATGACACACCCAAGCCCATTCCGGGGGCGG
981380
981381
GTTTCAATTCCTCATAGGTACGATAAAAAC
CCGCCAGCTCCGGACGGAAGCGAGGCAACGGCGGAA
981446
981447
GTTTCAATTCCTCATAGGTACGATAAAAAC
GGAATTATGGCTACGTATTAGAAAGTAAGCTAAAAGC
981513
981514
GTTTCAATTCCTCATAGGTACGATAAAAAC
AAGAGGAGGAAGGTTTCAGATGGGAGCAGTGGCAGGC
981580
981581
GTTTCAATTCCTCATAGGTACGATAAAAAC
TCGCACCGGTTGATCAGGCCGGTGCTATCCCACAATT
981647
981648
GTTTCAATTCCTCATAGGTACGATAAAAAC
AAAGGAGTTGATAGCGATATGCAGAATCAGTCCAATGC
981715
981716
GTTTCAATTCCTCATAGGTACGATAAAAAC
TTCATATAAATCAAAAGTGAATGTTTTCACTGTCGGAT
981783
981784
GTTTCAATTCCTCATAGGTACGATAAAAAC
TTTATTATTACATTGCTTAGAAAGGAGGCTGAACAA
981849
981850
GTTTCAATTCCTCATAGGTACGATAAAAAC
TTCATATAAATCAAAAGTGAATGTTTTCACTGTCGGAT
981917
981918
GTTTCAATTCCTCATAGGTACGATAAAAAC
TTCCGCGTAACAGCCAACTGCGACAGAAGATTGCCG
981983
981984
GTTTCAATTCCTCATAGGTACGATAAAAAC
TCTGTTCTACTTTTTTTTACTCTGGACAGTGGTGGA
982049
982050
GTTTCAATTCCTCATAGGTACGATAAAAAC
TCCTGCGAAATTATGGTTACAGGCGCCCAAGGCGCCA
982116
982117
GTTTCAATTCCTCATAGGTACGATAAAAAC
GAATCTTCAAACCGAATTCCCGGGATGTTCTGACACCA
982184
982185
GTTTCAATTCCTCATAGGTACGATAAAAAC
TCGGCCCGTCGCCGGATAAGTTTTTGTCCGGGAGGT
982250
982251
GTTTCAATTCCTCATAGGTACGATAAAAAC
GCGATATATCCAATTACTTGGCGCATAGTAAAATTATTTGT
982321
982322
GTTTCAATTCCTCATAGGTACGATAAAAAC
GTATAGAAATTGCCAGGATATGGCAAGAAAAAGAAA
982387
982388
GTTTCAATTCCTCATAGGTACGATAAAAAC
GTATCTCCAAGTTCAGTAGAACTATTTGATTCATCTA
982454
982455
GTTTCAATTCCTCATAGGTACGATAAAAAC
GAACCCACGGATATACCGATGTATCCCATGTGAACATA
982522
982523
GTTTCAATTCCTCATAGGTACGATAAAAAC
TGATAATTGCGCTATGCGGCAACGAGCTAATTAGCA
982588
982589
GTTTCAATTCCTCATAGGTACGATAAAAAC
TGTGACTCAACTTAGTGATAGGATTTGGCAAACTGCTT
982656
982657
GTTTCAATTCCTCATAGGTACGATAAAAAC
TCGGGAAGGTACCGACCTTATCCATCATGATGCTTA
982722
982723
GTTTCAATTCCTCATAGGTACGATAAAAAC
TATAGTAGATGCAGAAGAAGCCTTGCAGGAAATACT
982788
982789
GTTTCAATTCCTCATAGGTACGATAAAAAC
ACCTCCCTGAAGAAGTTTGGAAGAACATTGACACTA
982854
982855
GTTTCAATTCCTCATAGGTACGATAAAAAC
CGAAATAGTGACTACCGCATACTGCAAAATCAGGTA
982920
982921
GTTTCAATTCCTCATAGGTACGATAAAAAC
GGAGTGATAATATGGGTGGAACCTGGACCAGTCAAAA
982987
982988
GTTTCAATTCCTCATAGGTACGATAAAAAC
CTGCATATACATATGAGCCGTCGCAGCACATATCAGCG
983055
983056
GTTTCAATTCCTCATAGGTACGATAAAAAC
AGGCAAGAAAACCAATCAAGGATTGGAAAGCGTGTG
983121
983122
GTTTCAATTCCTCATAGGTACGATAAAAAC
GGGGAATACAGTTTGAACATCAAAATCAGACTGACAAA
983189
983190
GTTTCAATTCCTCATAGGTACGATAAAAAC
CGAATTGACTGTATTACCTATTCGGATGGAAGAAGAGT
983257
983258
GTTTCAATTCCTCATAGGTACGATAAAAAC
GGGCTGGATTTGAACTTATCGGCAGAATTGAAATCAGGGA
983327
983328
GTTTCAATTCCTCATAGGTACGATAAAAAC
TTCTGCCTCGGGGAAGGTCATGATATGTTCAAATGC
983393
983394
GTTTCAATTCCTCATAGGTACGATAAAAAC
CTCCTCATTTCTAAGCAATTTTGCCTTTGTAATAGT
983459
983460
GTTTCAATTCCTCATAGGTACGATAAAAAC
TTGTATCATATATTTTTATACTGTCAATAGTAATTT
983525
983526
GTTTCAATTCCTCATAGGTACGATAAAAAC
CTTGGAAGTGCGGAATTCTCCCTTCCAGGGGATGACCC
983593
983594
GTTTCAATTCCTCATAGGTACGATAAAAAC
CCAATAAGGTGTATGATGGGGAATTTACTGTTGATAC
983660
983661
GTTTCAATTCCTCATAGGTACGATAAAAAC
GATAGCACCTATATATTTACGTCCAGTATTAGACTGAT
983728
983729
GTTTCAATTCCTCATAGGTACGATAAAAAC
CTTTCAATACCTCCTCATTTATACTTTCAAAAAGTG
983794
983795
GTTTCAATTCCTCATAGGTACGATAAAAAC
AAGCAACGGGATCAAACCATCCAAAATAGTCATCAAGA
983862
983863
GTTTCAATTCCTCATAGGTACGATAAAAAC
AATGGATTGGATTTTGGAAAATGCTGATATATATTG
983928
983929
GTTTCAATTCCTCATAGGTACGATAAAAAC
TAAAAGAGGATTTAAAGACCTTATTCATCCCATCTG
983994
983995
GTTTCAATTCCTCATAGGTACGATAAAAAC
TCTTTAAATGGTGATATTTCTGATAGACTAGTTCTTA
984061
984062
GTTTCAATTCCTCATAGGTACGATAAAAAC
GTTGTTTTGTGAGGAGGTTTTCAGAAAGTAGATATAT
984128
984129
GTTTCAATTCCTCATAGGTACGATAAAAAC
TCAATAGCGTGATACAATCAAACTTCATGCGAAGCTA
984195
984196
GTTTCAATTCCTCATAGGTACGATAAAAAC
GGAAGAGATGAAGACATCGAATACATCCTTGAAAAAAT
984263
984264
GTTTCAATTCCTCATAGGTACGATAAAAAC
GGTTTAATCGAAGTAATCTTGTCGCCGCTTTTCTTGG
984330
984331
GTTTCAATTCCTCATAGGTACGATAAAAAC
TCAGAGATGATATGACGAATCAAGTTCTAAATGAAA
984396
984397
GTTTCAATTCCTCATAGGTACGATAAAAAC
TCTCTTGCAGCCCGTTCTCCAAAATTATCTTCAAAA
984462
984463
GTTTCAATTCCTCATAGGTACGATAAAAAC
TGAATGTAGCAATTGGGTTTTTCGTTTGGGCTGTCA
984528
984529
GTTTCAATTCCTCATAGGTACGATAAAAAC
CTAATTCAATATTGATTAAATGACTCTCTATAACAAA
984595
984596
GTTTCAATTCCTCATAGGTACGATAAAAAC
GTCCAAAAATGGAAAGAAAGATATCCGATGATGAAGA
984662
984663
GTTTCAATTCCTCATAGGTACGATAAAAAC
984692
Left flanking sequence : Till position 979303 (length
bp)
TAAATAGTTATAGGATATGTCAATATTTGCATTAATTTCAATTTATATTATAGGCACAACAAAACTATGA
TGAAATTAGCACGGGGACGGTATCTATTGT
Right flanking sequence : From position 984692 (length
bp)
CCCATAGAACTCGCTAAACTTCTGCTTTATATTTTAACTCTATATAAAACAAAAATCAACAATCAGAACA
AAAAAACTCTCTCAAGAGACCTATAAATCA
Print the CRISPR sequence : From position
bp To position
bp