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CRISPRs details
NZ_CP013828_5
Flanking alignement tool
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NZ_CP013828_5                                                                                                                 
top
Strain :
Ruminiclostridium thermocellum AD2 GCF_000255615
RefSeq :
NZ_CP013828 (chromosome circular)
CRISPR id :
NZ_CP013828_5
DR consensus (30 bp) :
GTTTCAATTCCTCATAGGTACGATAAAAAC
Number of repetitions :
29
Begin Position :
3473279
End Position :
3475182
3473279
GGTTCAATCCTTAACGGGTAAAAAAAACAC
GGATATTGAAAGTTGACGAAGAGGGAAAGAATAAACG
3473345
3473346
GTTTTAATTCGTCATAGATGCGATAAAAAG
TTTATCAAAGCTTTTGAAAACAGTTGCCTGAAAATTTA
3473413
3473414
GTTTCAATTCCTCATTGGTACGATAAAAAC
GTATTTGAACGGCACATCCTTCAAATCCGCACCATC
3473479
3473480
GTTTCAATTCCTCATAGGTACGATAAAAAC
TTGCTATAAAAAACAATAGAAATGCGATAGGTATAGAAT
3473548
3473549
GTTTCAATTCCTCATAGGTACGATAAAAAC
GAGATAAGCCTTGTTATACTGTTCTGGTTAGACCT
3473613
3473614
GTTTCAATCCCTCATAGGTACGATAAAAAC
AATTTGTGCATGCAGGATGGGAAAAAATTATTAAAA
3473679
3473680
GTTTCAATTCCTCATAGGTACGATAAAAAC
GGAGGGATTTGTATGAAAGCAATGAAAGTTTTCACTAT
3473747
3473748
GTTTCAATTCCTCATAGGTACGATAAAAAC
TAGAAGCCTCCAACCAAAGGAAGAATCTATAGGAG
3473812
3473813
GTTTCAATTCCTCATAGGTACGATAAAAAC
GTGAGCCTGATGTTTTGTTCCCTTTCCACGCAGGAACA
3473880
3473881
GTTTCAATTCCTCATAGGTACGATAAAAAC
GGGTTTAAATCTGTACCAATGCTTGAAGTAGATGGAAATA
3473950
3473951
GTTTCAATTCCTCATAGGTACGATAAAAAC
TGACTGAAAAGGATGTTATCAAATTGTTTGCCATAT
3474016
3474017
GTTTCAATTCCTCATAGGTACGATAAAAAC
AAGAACAAATTGAGAAATTAGGAGTTGAGATATAATGTG
3474085
3474086
GTTTCAATTCCTCATAGGTACGATAAAAAC
TAATATTGATGGGTCTGACAGTTTCGTCCCTCCAAATT
3474153
3474154
GTTTCAATTCCTCATAGGTACGATAAAAAC
GTGCTTGTGATTCAAGTTCATTTTCTGATATAGTCAGCA
3474222
3474223
GTTTCAATTCCTCATAGGTACGATAAAAAC
TCTGTTCAATTGCTGTTATAGTATCGACTTGCATTT
3474288
3474289
GTTTCAATTCCTCATAGGTACGATAAAAAC
ATAAGAACGAAAAAACAGGTGCTAGCGAGCGCACAA
3474354
3474355
GTTTCAATTCCTCATAGGTACGATAAAAAC
CAGGGTAGCTATAACCCCCGCCTCCGGATTCACAT
3474419
3474420
GTTTCAATTCCTCATAGGTACGATAAAAAC
AGGATTGGATTCGGATTGGATTGGATTGGAT
3474480
3474481
GTTTCAATTCCTCATAGGTACGATAAAAAC
TAATGCATTGGGTAAGCTGTGTATGCACTGAATTAA
3474546
3474547
GTTTCAATTCCTCATAGGTACGATAAAAAC
GGATATTAAAACCAGGGATGAACAACTTGAAGCAC
3474611
3474612
GTTTCAATTCCTCATAGGTACGATAAAAAC
AACAAAGATTGACATTGGATGCTTCACATTTAATTT
3474677
3474678
GTTTCAATTCCTCATAGGTACGATAAAAAC
GACGCACTTCCTGAACAAAATTTCATGGCACAATATCA
3474745
3474746
GTTTCAATTCCTCATAGGTACGATAAAAAC
GAGGTGTCAAGAAAGGATGATGGTATGAAGGTTTTAGAGC
3474815
3474816
GTTTCAATTCCTCATAGGTACGATAAAAAC
GCGTTTGTACCCTCTGAGGGGTACTTTCAGGAGTTCCT
3474883
3474884
GTTTCAATTCCTCATAGGTACGATAAAAAC
GAGTATGCAATTTGCAATGATTTCGATTTTTTTGTTACGT
3474953
3474954
GTTTCAATTCCTCATAGGTACGATAAAAAC
GTCCTTGCCCTTGACTGCATGAGCGGCGAGCCGGA
3475018
3475019
GTTTCAATTCCTCATAGGTACGATAAAAAC
TGGCAGTAGGCTCTTACTTCCTCAAGGGTGGGTGGTA
3475085
3475086
GTTTCAATTCCTCATAGGTACGATAAAAAC
CCCGGGAGCACCCCAGCCTGGACCAGACCGTCCAGGA
3475152
3475153
GTTTCAATTCCTCATAGGTACGATAAAAAC
3475182
Left flanking sequence : Till position 3473279 (length
bp)
GCCAAAATGCTAATTATTGCAATGTATATTTATTAATACATGCGAGGTTACTATTGCCATTTGAGAAAAT
TTTAAGATTATATGTTATACGATAACAAAA
Right flanking sequence : From position 3475182 (length
bp)
CCATAAAGCCTGCTAAACTTCTGCTTTTTATTTTAACCAATTGCAAAATAAAAATCAATACAAAAAAACA
AAAAATCCCTCTAAACAGCTACAAATCAGC
Print the CRISPR sequence : From position
bp To position
bp