Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP014536_4                                                                                                                 top


Strain : Salmonella enterica subsp. enterica serovar Typhimurium GCF_001577505 RefSeq :NZ_CP014536 (chromosome circular)
CRISPR id : NZ_CP014536_4
DR consensus (29 bp) : CGGTTTATCCCCGCTGGCGCGGGGAACACNumber of repetitions :21
Begin Position : 3120582 End Position : 3121831

3120582ACGGCTATCCTTGTTGGCGCGGGGAACACATCTTCATATTGCGTGACGCTGCCGATGAACG3120642
3120643CGGTTTATCCCCGCTGGCGCGGGGAACACTCTTTATCAGCTAACCATTTCCAGAACTCGTC3120703
3120704CGGTTTATCCCTGCTGGCGCGGGGAACACTATAATATGAATTAATTTTTGCGCATAACCTG3120764
3120765CGGTTTATCCCCGCTGGCGCGGGGAACACTGCCCGTTCTGCCTCTTCGCACTCTCGATCAA3120825
3120826CGGTTTATCCCCGCTGGCGCGGGGAACACTGCGTAATGGGCTACCTGAACTTCACATATCC3120886
3120887CGGTTTATCCCCGCTAGCGCGGGGAACATATTAAGCGCGCAAAGTTTGGGTTAATTGGACA3120947
3120948CGGTTTATCCCCGCTGGCGCGGGGAACACCGTATTCGTCACACAGCCCCGTCCAGAAATGA3121008
3121009CGGTTTATCCCCGCTGGCACGGGGAACACTAACGAACTGAATAAAATGTCAGAAAGTGACG3121069
3121070CGGCTTATCCCCGCTGGCGCGGGGAACACGCAGCTTAGCGACGAAATTAAAACCGAACTCAC3121131
3121132CGGTTTATCCCCGCTGGCGCGGGGAACACGGTAAAGCCACACCATTTTTTATTGACCTCGC3121192
3121193CGGTTTATCCCCGCTGGCGCGGGGAACACCTAGGAGGCGTAATGAATACTACGTATCAAAA3121253
3121254CGGTTTATCCCCGCTGGCGCGGGGAACACGTGGTGGCCTCAAATAAATTCGAGCGCTGGAG3121314
3121315CGGTTTATCCCCGCTGGCGCGGGGAACACTCGACGTGGACGAGGAGTTACTCAACCGCTGC3121375
3121376CGGTTTATCCCCGCTGGCGCGGGGAACACAGCGCCACATGGCCCACCGGCACCACCCGATC3121436
3121437CGGTTTATCCCCGCTGGCGCGGGGAACACAAATGACCAAATCAGAAATCTTCACCAAAGCC3121497
3121498CGGTTTATCCCCGCTGGCGCGGGGAACACTAATGGCCACAGTAAGTCAAACGGTTCTGGAA3121558
3121559CGGTTTATCCCCGCTGGCGCGGGGAACACGAGTCCGGGGGTTATATAGTTATTTAATGAGC3121619
3121620CGGTTTATCCCCGCTGGCGCGGGGAACACGATGTAACTGATAGCGAAATATATTGGGATAA3121680
3121681CGGTTTATCCCCGCTGGCGCGGGGAACACGAAACGTAAACAGGGTAAGATACAACTCTGCA3121741
3121742CGGTTTATCCCCGCTGGCGCGGGGAACACTGTAAAGGGTGGTCTGGAAGGGGATCGGCAAA3121802
3121803CGGTTTATCCCCGCTGGCGCGGGGAACAC3121831
Left flanking sequence : Till position 3120582 (length bp)
CATGGCCTTCTCCTGTCTAAAAGCCTCCCCGGGAAAACGCGGCCTTTTTACTTTACAGGTTTGTAGCTGC
CATTACTGGTACACAGATTATGATTATGCA
Right flanking sequence : From position 3121831 (length bp)
ACTAAACGGATATAATTGTTTATAAACTACTTTTTGTCAGCACCACATTCTACCAACATAATCGCAACAA
TTTAAATTATTAAAGAACAGCTAATTTGCT
Print the CRISPR sequence : From position bp To position bp