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CRISPRs details
NZ_CP014971_3
Flanking alignement tool
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NZ_CP014971_3                                                                                                                 
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Strain :
Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 GCF_001623765
RefSeq :
NZ_CP014971 (chromosome circular)
CRISPR id :
NZ_CP014971_3
DR consensus (29 bp) :
GTGTTCCCCGCGCCAGCGGGGATAAACCG
Number of repetitions :
17
Begin Position :
1006001
End Position :
1007014
1006001
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TGAGCAACGACAGTAAATAATTTTTCGTGCTG
1006061
1006062
GTGTTCCCCGCGCCAGCGGGGATAAACCG
AACCGCTGGCGGGCTGATTGGTCTGCAACCAC
1006122
1006123
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CAACCAGGCTGGATCGTAACTCCTATCCCCTC
1006183
1006184
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CCATTATTCAACCCTCCAGGCTCGCGCCGGCT
1006244
1006245
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CCAGTGGGCGTAGCCAGCTCATCGCTATTTTGC
1006306
1006307
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CGTTGCGGATTATCGTTAAGACTGAAGGAAGT
1006367
1006368
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CGTCACTACCGAGACCGAGACCGAGACCGAGACCGAGA
1006434
1006435
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CCGCTGACGCACTGGATCAACCTGACGCAACG
1006495
1006496
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TTGCAGGGCGATATTGTTGTTGGTGAATGGGA
1006556
1006557
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CGTCGCGGAAAATTTCGCATTGACGATAAAGA
1006617
1006618
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TTACGTGTTTATTCATCTGTTGCATTAGATTC
1006678
1006679
GTGTTCCCCGCGCCAGCGGGGATAAACCT
GAGGCGTACAGGCTGTTAGATGAGAAATTACC
1006739
1006740
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TGGATTATCTGTATTTTACGGAAGTGGGCGCG
1006800
1006801
GTGTTCCCCGCGCCAGCGGGGATAAACCG
GTCGTTCATCAGGCACTACCGGCACTTTCTGG
1006861
1006862
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CCACGTTCGGCGATGTTGGCCCCATCGGTCCA
1006922
1006923
GTGTTCCCCGCGCCAGCGGGGATAAACCG
AAACGGTAGTGTTTTAAAACCGTTTCGAGGTGC
1006984
1006985
GTGTTCCCCGCGCCAGCGGGGATAAACCG
1007013
Left flanking sequence : Till position 1006001 (length
bp)
ATAAGTTGAATGTTCTTTAATAATAAGGAATTGTTATCTTACCGTTGGTAGTTTGTTATGTAGTAAAAAA
GGGCTTTTAGAACAAATATATAGTTTTAGT
Right flanking sequence : From position 1007014 (length
bp)
ATAAGGCGCGGTGCCACCCTCGGCTTTAATTGTGTTCCCCGCGCCGACGCGTTCCAGCGCACGTTACTCG
ATCGTGTTCCCCGCGCCAGCGGGGATAAAC
Print the CRISPR sequence : From position
bp To position
bp