Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP015923_3                                                                                                                 top


Strain : Salmonella enterica subsp. enterica serovar Newport str. Levine 1 GCF_000271885 RefSeq :NZ_CP015923 (chromosome circular)
CRISPR id : NZ_CP015923_3
DR consensus (29 bp) : GTGTTCCCCGCGCCAGCGGGGATAAACCGNumber of repetitions :14
Begin Position : 953503 End Position : 954324

953503GTGTTCCCCGCGCCAGCGGGGATAAACCGCCAGCCTGTAGCGTGGGGGCGTTGGGTAGCCT953563
953564GTGTTCCCCGCGCCAGCGGGGATAAACCGCATCTTTTACGCATGTTGATGTGCGTTCAAAT953624
953625GTGTTCCCCGCGCCAGCGGGGATAAACCGAAATCGTCAATAAAATTATTGGCGCGCCATCC953685
953686GTGTTCCCCGCGCCAGCGGGGATAAACCGATAATTTGCTGAACTACGTCCGTATTGAGCTG953746
953747GTGTTCCCCGCGCCAGCGGGGATAAACCGTGGCCGGAGCCTAAAGACGGGGAGCCGCGTTT953807
953808GTGTTCCCCGCGCCAGCGGGGATAAACCGGGGGGTGATAACCGCCTCGCTGAACGCTACGC953868
953869GTGTTCCCCGCGCCAGCGGGGATAAACCGAGTGAAAAATTGCGGTTCGTCCTCCTCATCGT953929
953930GTGTTCCCCGCGCCAGCGGGGATAAACCGACTAACGAAAGATTAAACCAGCGCATTGAGTT953990
953991GTGTTCCCCGCGCCAGCGGGGATAAACCGCATTCGCTCAATAGCGGCCCGCGTGGCGGTGA954051
954052GTGTTCCCCGCGCCAGCGGGGATAAACCGGGGATTATGTCCTCTAAAGACTGGCTAATCAC954112
954113GTGTTCCCCGCGCCAGCGGGGATAAACCGCGCGCCCTGCGTGATTTTGAAAATCTGGTGGA954173
954174GTGTTCCCCGCGCCAGCGGGGATAAGCCGTTGAATACGTCGCGATACCAGTCACTCCGGAA954234
954235GTCTTCCCCGCGCTAGCGGGGATAAACCGAGGGGCGTTCCGCAGTCGGCAAGGGCTGAAAA954295
954296ATGTTCCCCGCGTCAGCGGGGATAAACAC954324
Left flanking sequence : Till position 953503 (length bp)
ATAAGTTGAATGTTCTTTAATAATAAGGAATTGTTATTTTACCGTTGGTAGTTTGTTAGGTAGTAAAAAA
GGGCTTTTAGAACAAATATATAGTTTTAGT
Right flanking sequence : From position 954324 (length bp)
GTTTCACCAGCATATCAGGACGTTTTTTCCGCCTTCGCCAGCTCTTTTACCAACGGCAGCATTATCCGCA
CTACATCGCGGCTACGGCGCTCAATCCGCC
Print the CRISPR sequence : From position bp To position bp