Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP015995_2                                                                                                                 top


Strain : Escherichia coli GCF_001660565 RefSeq :NZ_CP015995 (chromosome circular)
CRISPR id : NZ_CP015995_2
DR consensus (29 bp) : GTGTTCCCCGCGCCAGCGGGGATAAACCGNumber of repetitions :23
Begin Position : 1026990 End Position : 1028360

1026990GTGTTCCCCGCGCCAGCGGGGATAAACCGGCATTGACGCTTTAAACGACGACGGACGCCAC1027050
1027051GTGTTCCCCGCGCCAGCGGGGATAAACCGAAAACAGCCTTTAGATTAGTACCTGACGACCG1027111
1027112GTGTTCCCCGCGCCAGCGGGGATAAACCGTAAACGCACCTGGCGCGCCACTTTATCAACAA1027172
1027173GTGTTCCCCGCGCCAGCGGGGATAAACCGACGGCGTGGATTGAGGGACGGGTATTTGGTCC1027233
1027234GTGTTCCCCGCGCCAGCGGGGATAAACCTAGATCGCGCCACGAGGAAACGAATATGAACGG1027294
1027295GTGTTCCCCGCGCCAGCGGGGATAAACCGATACAAACGCGGTGTTTATCAATATGAATTTT1027355
1027356GTGTTCCCCGCGCCAGCGGGGATAAACCGGCACCACGCGTACCCCGATGTTTGTTTTGCCA1027416
1027417GTGTTCCCCGCGCCAGCGGGGATAAACCGATCCGGCTATATCTTTGAGCATTACAGAAATA1027477
1027478GTGTTCCCCGCGCCAGCGGGGATAAACCGCTATTGCTTTCGTACAGATTTTCAGTGGTGCT1027538
1027539GTGTTCCCCGCGCCAGCGGGGATAAACCGAAAATTCTGTGTTTCGACCATTACTTCGGTAA1027599
1027600GTGTTCCCCGCGCCAGCGGGGATAAACCGATTCTTGATCACGCTTTTACCGAAGTAATGGT1027660
1027661GTGTTCCCCGCGCCAGCGGGGATAAACCGGGGGTAGAATTATTCTTCGTGAGCGATTTATC1027721
1027722GTGTTCCCCGCGCCAGCGGGGATAAACCGCGGCGTTCCGTGCGGCAATTGGAATCACACCA1027782
1027783GTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTCTGAATCCGATATTCTTCAGCACCTTCA1027843
1027844GTGTTCCCCGCGCCAGCGGGGATAAACCGAGCGTCAATCAGCGCGTCTATCGCGTCACTTT1027904
1027905GTGTTCCCCGCGCCAGCGGGGATAAACCGATTTGGGGGTATGAGAGCGCCGAGCCGTTCGG1027965
1027966GTGTTCCCCGCGCCAGCGGGGATAAACCGGCTCCCTGTCAGTTGTAATCGATAACGTTGAT1028026
1028027GTGTTCCCCGCGCCAGCGGGGATAAACCGATGTAGGGGCAATCGAACGATTCTCTGCCGAC1028087
1028088GTGTTCCCCGCGCCAGCGGGGATAAACCGCCGAGCCCGATTATCGGCATGAGCGATGCGGA1028148
1028149GTGTTCCCCGCGCCAGCGGGGATAAACCGTCGAAGAAGAAAGGGAAATAATGCGAGGAACG1028209
1028210GTGTTCCCCGCGCCAGCGGGGATAAACCGTATTACGCGCCAGCAATGCTGACAGCGGCAAA1028270
1028271GTGTTCCCCGCGCCAGCGGGGATAAACCGCGCGAGAGCCAGCAAAACGCCAGGGCACAAAA1028331
1028332GAGTTCCCCGCGCCAGCGGGGATAAACCA1028360
Left flanking sequence : Till position 1026990 (length bp)
ACTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAA
ATCATTAATTAATAATAGGTTATGTTTAGA
Right flanking sequence : From position 1028360 (length bp)
CCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGT
AACCCCTCATGTTCAAAATAGTTCTCCATG
Print the CRISPR sequence : From position bp To position bp