Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP016000_1                                                                                                                 top


Strain : Burkholderia sp. KK1 GCF_001988975 RefSeq :NZ_CP016000 (chromosome circular)
CRISPR id : NZ_CP016000_1
DR consensus (28 bp) : GGTCTATCTCCGCGCACGCGGAGGAACCNumber of repetitions :10
Begin Position : 1888270 End Position : 1888846

1888270GAGCTATCTCCGTGTAGGCGGAGGAACCAGGCAGTCTCAGTCGCCCATTCTGAACGGCAAC1888330
1888331GGTCTATCTCCGCGCGTGCGGAGGAACCACGAACGCGATCAAGTAGCCGACAAGTAGCTTG1888391
1888392GGTCTATCTCCGCGCACGCGGAGGAACCCAAGGGTCTAAACGCATTGAACACCCTTGACAA1888452
1888453GGTCTATCTCCGCGCACGCGGAGGAACCACATCGCGCATGACGCGCAGATCGTGCGCCATG1888513
1888514GGTCTATCTCAGCACACGCGGAGGAACCCGTGTCGTGATCAAGCTAGACGTCACGCAGTCG1888574
1888575GGTCTATCTCCACACACACGGAGGGACCTGAATCGTGACCGCTGCGCAGTTGCCGGGGCTG1888635
1888636GGTCTATCTCCGCGCAGGCGGAGGAATCCGGGTGTACGTCAAACACTGCAAGCAGCAGTGG1888696
1888697GGTCTATCTCCGCGCACACGGAGGAACCATCTGCTTCTGGTCGATGCGATCGAGCTTGACG1888757
1888758GGTCTATCTCCGCACACACGGAGGAACCGAAATCGCCTTCCCGTCCGCGCAGGAAAACGAC1888818
1888819GGTCTATCTCCGCACACACGGAGGAACC1888846
Left flanking sequence : Till position 1888270 (length bp)
GTACGGATTATTTTGTGGCGGGTGGGAGAAGGGCGCGGGCGGTGGGAGGTGGGTGGAGCGGGTGGGGTTG
GGGTTGTGGGGTGAGGTGCCAGTCGTTGGG
Right flanking sequence : From position 1888846 (length bp)
TCTCCCTCACAACCCCATGACAGAAAAGCCAAATACCCCATTAGCATCCAGTAAAACCATCCAAATTTTC
AAAGAACGAAACCACTCCCACCTACCCCAC
Print the CRISPR sequence : From position bp To position bp