CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NZ_CP016012_2
Flanking alignement tool
Page manual
  
Home Page
NZ_CP016012_2                                                                                                                 
top
Strain :
Salmonella enterica subsp. enterica serovar Newport GCF_001890185
RefSeq :
NZ_CP016012 (chromosome circular)
CRISPR id :
NZ_CP016012_2
DR consensus (29 bp) :
GTGTTCCCCGCGCCAGCGGGGATAAACCG
Number of repetitions :
27
Begin Position :
959130
End Position :
960744
959130
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CTGGAACGGCAGTATTTAAAAGGGGTTATTGA
959190
959191
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TGGGCGCCCGGATTGTTTGCGTGCGGCGACGG
959251
959252
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TTGATTTACCCGCCACTTATTCCCCATTGCAT
959312
959313
GTGTTCCCCGCGCCAGCGGGGATAAATCG
GGACTATCAAACCATCTATGATGCCAATTTTA
959373
959374
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CGCGGGGCTGGTATTCGATACAGACCCGGCTA
959434
959435
GTGTTCCCCGCGCCAGCGGGGATAAACCG
GGAATAAAAATGAATTTGAGTCAACTCTATAA
959495
959496
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CGTTAGGCTGCGGTTGGGCACCGAAGAAAAAA
959556
959557
GTGTTCCCCGCGCCAGCGGGGATAAACCG
ATTATCCCGGAAATCGTGATCAACTACGCAGG
959617
959618
GTGTTCCCCGCGCCAGCGGGGATAAACCG
ATTGTTATTGCGGTAACGGATAATTTATCATT
959678
959679
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CCTGGCGATCGCATTTGGGTGCGGGAAACATT
959739
959740
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CCGAATATGGTGATAATGTTGCACCTTCGCTC
959800
959801
GTGTTCCCCGCGCCAGCGGGGATAAACCG
GACTCGGCCTGTTTTTTGATTTTGACAATCAG
959861
959862
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CCAATAACCGACGAGGGCAAACGCCGTGCGCG
959922
959923
GTGTTCCCCGCGCCAGCGGGGATAAACCG
AGGACTGAGGGAATAGGGACCGTAATTGTAAA
959983
959984
GTGTTCCCCGCGCCAGCGGGGATAAACCG
ACAATGTTGCGTCTAATTCTCATTAATTAAAA
960044
960045
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CAGACGAAAATCAGCCCGCATATTCCGACACA
960105
960106
GTGTTCCCCGCGCCAGCGGGGATAAACCG
AACAGTGGTTTTAGGTTGTCGGTGCTGATCCC
960166
960167
GTGTTCCCCGCGCCAGCGGGGATAAACCG
ATTAAACAACAGGATTTTGCAATTACTGTTGG
960227
960228
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CAGACGGCAGCAGCGTGAAACACGTCAGTATT
960288
960289
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TCAGCTGTTCCATACTCACCCCCTGTGCAATC
960349
960350
GTGTTCCCCGCGCCAGCGGGGATAAACCG
GCGATGTATGCCGCGACGATCGAGAGCGAACT
960410
960411
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CAGCAGATGAAAAATATTTACAGATTGGTAAA
960471
960472
GTGTTCCCCGCGCCAGCGGGGATAAACCG
AAAAAATCCCGCTGACAATATTTTGCCACCTC
960532
960533
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CCGGAAAACTATCTCTATCGCAGGCTGGATAT
960593
960594
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TTCCAAAGGTACTCCCATATCTCCAGCCAACG
960654
960655
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TAAGTTACGCCAGTGCGGGCGTGTTGCTCATC
960715
960716
GTGTTCCCCGCGCCAGCGGGGATAAACAC
960744
Left flanking sequence : Till position 959130 (length
bp)
TGTTGAAAATCAATAAGTTATAGATCTTTAAAAATTAGGAAAAGTTGGTGGGTTTTTTGTGCGCTAAAAA
AGTATTTAAATTCAATTGGGTAGATTTAGG
Right flanking sequence : From position 960744 (length
bp)
GTTTCACCAGCATATCAGGACGTTTTTTCCGCCTTCGCCAGCTCTTTTACCAACGGCAGCATTATCCGCA
CTACATCGCGGCTACGGCGCTCAATTCGCC
Print the CRISPR sequence : From position
bp To position
bp