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CRISPRs details
NZ_CP016408_3
Flanking alignement tool
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NZ_CP016408_3                                                                                                                 
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Strain :
Salmonella enterica subsp. enterica serovar Infantis GCF_001931575
RefSeq :
NZ_CP016408 (chromosome circular)
CRISPR id :
NZ_CP016408_3
DR consensus (29 bp) :
CGGTTTATCCCCGCTGGCGCGGGGAACAC
Number of repetitions :
31
Begin Position :
3478742
End Position :
3480638
3478742
GTGTTTATCCCCGCTGACGCGGGGAACAT
TTTTCAGCCCTTGTCGACTGCGGAACGCCCCT
3478802
3478803
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ACCGACAGCCAGGTGACGAACGCCACCAACGA
3478863
3478864
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGGTTCATGACGTATAAGCTCATATACCCTGT
3478924
3478925
CGGTTTATCCCCGCTGCAGCGCTGTTTAA
ATGGCTGGCCGCGGTTTATCCCCGCTGGCGCGGGGAACACTGGGGTTACCTGCACTCCAGTCCCGGCAGGTA
3479025
3479026
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ATCAGCGGCACTATCAGCCCAATTTATAAGAC
3479086
3479087
CGGTTTATCCCCGCTAGCGCGGGGAACAC
TGTTGCTGCCATTGCGGCGCAGCCCTGCCAAG
3479147
3479148
CGGTTTATCCCCGCTAGCGCGGGGAACAC
GTTAACTATTACGATCCAACGCATAACAACAG
3479208
3479209
CGGTTTATCCCCGCTAGCGCGGGGAACAC
TGCTGCCAGCGTGAAATATAATTCTGCAATCT
3479269
3479270
CGGTTTATCCCCGCTAGCGCGGGGAACAC
ATTTCGTACCCGTCTTCATTAATCCAATCCTG
3479330
3479331
CGGTTTATCCCCGCTAGCGCGGGGAACAC
TTTTCGCCACAAAAAACGATCCCGTCGCCGTT
3479391
3479392
CGGTTTATCCCCGCTAGCGCGGGGAACAC
CAACCCCGCCGCCGCCTGTATTTAACAAG
3479449
3479450
GGGTTTATCCCCGCTAGCGCGGGGAACAC
CGAAACAGGAAACTAAATAAATGAACGAAACG
3479510
3479511
CGGTTTATCCCCGCTAGCGCGGGGAACAC
GACGGTGGAAATCGCTATTGTCCGCGAGATGT
3479571
3479572
CGGTTTATCCCCGCTAGCGCGGGGAACAC
ACGATCCATTTTTTCAGGTCGAATAAAACGCC
3479632
3479633
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GCACCGCCACCGGTGCGGCTGGCCGTCTCCTG
3479693
3479694
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ACGCCCGGCACCGTTGCCAGTCCCTGCGCTAC
3479754
3479755
AGGTTTATCCCCGCTGGCGCGGGGAACAC
GTCGTTACCATTGCGTCATAGGCGCGGATCAC
3479815
3479816
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GCAGGCGGCCATCTCGACCCCCGGCAATAGAG
3479876
3479877
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ACGGCGGTGAAAACTCGGGCAAAACGGCATTG
3479937
3479938
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GCTCACGCGGCCTTTTTATTTTGCTACTGTAT
3479998
3479999
CGGTTTATCCCCGCTGGCGCGGGGAACAC
AGATTTCACAGGTACGCATCGAGTAATTTATG
3480059
3480060
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GATTTTGTTCGCTACGTCGCCAGCCATGCCAA
3480120
3480121
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TTGGTCATGGTTGAGACAAACGGGCCTGGTAG
3480181
3480182
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TCGCCTTCAGGAAGAAACCTACATCGAACACG
3480242
3480243
CGGTTTATCCCCGCTGGCGCGGGGAACAC
CTGCAATTCGCGTTCTCTGGCCTGTTTCGCCA
3480303
3480304
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GCTGACATGGAAACCGTCGCCGGCAATTGGGC
3480364
3480365
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GCGGAGAATTATATATCGGAATGTTACAGGAAA
3480426
3480427
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GTTAAATACAATTCGCCCGCCATTAAAATCAA
3480487
3480488
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GATGAATTCAGGGGGCCAGTTTTTGTAAAAAT
3480548
3480549
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GGGTTGAGGGGCTTTATATAGTGGTATTCCGC
3480609
3480610
CGGTTTATCCCCGCTGGCGCGGGGAACAC
3480638
Left flanking sequence : Till position 3478742 (length
bp)
GGCGGATTGAGCGCCGTAGCCGCGATGTAGTGCGGATAATGCTGCCGTTGGTAAAAGAGCTGGCGAAGGC
GGAAAAAACGTCCTGATATGCTGGTGAAAC
Right flanking sequence : From position 3480638 (length
bp)
ACTAAAACTATATATTTGTTCTAAAAGCCCTTTTTTACTACATAACAAACTACCAACGGTAAGATAACAA
TTCCTTATTATTAAAGAACATTCAACTTAT
Print the CRISPR sequence : From position
bp To position
bp